Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g0928 ATGCATTTGACTCCATTTTTCCGCAATTTCAACACATTAACCTTGCAACAAATTCGTTTCTATACTCGTCGTCGTGACCCTTTTCCCACCAAAATTTGCCACTACTTAAACCGTGCAAAACTCATCGATTCAATTCGACTTTCACTTCGCTCCAAAAACCCTAATTTCACACTCCCTAATCTCATAAACCACCGTTTATTTGACTCTTTTGTTCTCACTCATGCACTTCGTTCTGCACCTGGTGCAGATTCTGCACTTTCTCTCATTAACACCATTGAGAATGCAAAAAGTTCCAATTTTTCACATACCCAGAATACCCTACATGCCCTTGCCACTGTTCTTGCCAAATCCGGTCGATGTGTTGAGCTCAAATCGCTTATCGATGATATCCGAAGTAAACGGTTTGGCAATGTTAAGATTAGTTTTATGAATTTAATTAAGTGGTATGCTGAAGCTAAGGATATTGATTCTGTTCTCGAGGTTTGGGATCGGTATAGAGTTGAAAGTAAAATAGTATGTACTGAATCTTATAACATTGTTATGGCTCTTTATGTTGAAATGGGAAAGGATTTTGAGGCTGTTGGAGTTTTTTGTAAGATGGTTGATGATGGGTCGGTTCCGAATTGTAGAAGTTATAGTATAATAATTGAGCATCTTGTGAAATGTAGGAAGTTTTTGGAAGCTATTGAGGTTTTTAATTTGATGCCTTTGATGAGGATTAAACGTACTTTGAAGCAGTATTCGGTTTTAATTGAAGGTTTGGTTGGTAGTAAAATGTTTGAAGAAGTTGGTGTTTTGGTTAATGAGATGCAAGTTGATGGAATTTTACCTAGTCGAACGGTGAGTTTGTTGTTGCAGCAGGTAAAGGATGAAGGATTTCTTAAGGATGTAGATGAATTGTTTGGAGAAATTTGCCCGGATGAGAGAATCAAGAATGTAAGTTTTTCTATTGATGACAGTGACGAGGATGAGGGTGAGAATGAGAATGATGCTTCGCAATGTGATCATATAGATGGGGTCTGCTTAAAACCGTGGATAGATCCGCGGTCTTTGGCTAGTGCCTTGCAGAATTGGAGTCCTGATGAGGTATCAGCACTAGAGGGTGCAAACTTTGTGTGGACAACTAGGTTGGTGTGCAAGATACTTAGAAGTTTCAAGTCACCGGATACTGTGTGGAATTTCTTCTGCTGGGTTGCAGATCAACCTGGATTTACTCATAATATATACACGGTGCAAAGAATCATGACGCTTCTAGCTCGCCATGGACGTACTGAATTAGTTGATAAACTCATATATAAGATCAGAATAGAGGGAATGAGACTACCATTCAGTACCATAAGGTTAATCATCGACTTTTATGGGATTTCAAAAAATGCTGATGCTGCTCTGAAGGTTTTCAACGATGATAGAATACTTTGTGGGTCTATATCGAAAGTTAACTTGATGCTTCTGTATTCTTCTCTTTTAAGAACATTAACTAAGTGTGGTAGGGATTCTGATGCCCTGGAAATGGTTGATGAGATGATTTTAAATGGTATTTGCCCTGATATCCAAACATTTTCAGGTCTAATGCAATATTTTTCACAAAGTGGAGACATTAAAACTGTGCACAAACTCTTTACGATGGTCAAGCAGAGTGGTTTTAAGCCAGACGCGTATCTGTTTAAGGTGCTAATCGAAGGTTATTGCCAGTCGAAAAGAGCTGCACTGGCTTGGAAGCTATTTGAAGACATGAAGAATGCAGGTTTGATGCCTGATTCTTCCACCAAAGAGTTGCTTGTGAAGAGCCTTTGGAGAGAAGGGAGACGGAGAGAAGCCGCAGCAGTTGAAGAGAGCTGTGAGGAAGTGAATGTGGTCCTTCCACTTGCATTACCTGGTCATGTTTGGACCGTCAGCTCTGCAGATCTCACAAGAGTTTATAACATTTATTCGAATTGTTTTGCTTCAAAAGGTGGCTAG 1959 0.3951 MHLTPFFRNFNTLTLQQIRFYTRRRDPFPTKICHYLNRAKLIDSIRLSLRSKNPNFTLPNLINHRLFDSFVLTHALRSAPGADSALSLINTIENAKSSNFSHTQNTLHALATVLAKSGRCVELKSLIDDIRSKRFGNVKISFMNLIKWYAEAKDIDSVLEVWDRYRVESKIVCTESYNIVMALYVEMGKDFEAVGVFCKMVDDGSVPNCRSYSIIIEHLVKCRKFLEAIEVFNLMPLMRIKRTLKQYSVLIEGLVGSKMFEEVGVLVNEMQVDGILPSRTVSLLLQQVKDEGFLKDVDELFGEICPDERIKNVSFSIDDSDEDEGENENDASQCDHIDGVCLKPWIDPRSLASALQNWSPDEVSALEGANFVWTTRLVCKILRSFKSPDTVWNFFCWVADQPGFTHNIYTVQRIMTLLARHGRTELVDKLIYKIRIEGMRLPFSTIRLIIDFYGISKNADAALKVFNDDRILCGSISKVNLMLLYSSLLRTLTKCGRDSDALEMVDEMILNGICPDIQTFSGLMQYFSQSGDIKTVHKLFTMVKQSGFKPDAYLFKVLIEGYCQSKRAALAWKLFEDMKNAGLMPDSSTKELLVKSLWREGRRREAAAVEESCEEVNVVLPLALPGHVWTVSSADLTRVYNIYSNCFASKGG* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g0928 652 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 551 585 IPR002885 -
Tpr2g0928 652 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 516 550 IPR002885 -
Tpr2g0928 652 Pfam PPR repeat family 557 597 IPR002885 -
Tpr2g0928 652 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 173 207 IPR002885 -
Tpr2g0928 652 Gene3D Tetratricopeptide repeat domain 479 650 IPR011990 GO:0005515
Tpr2g0928 652 Gene3D Tetratricopeptide repeat domain 144 339 IPR011990 GO:0005515
Tpr2g0928 652 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 481 515 IPR002885 -
Tpr2g0928 652 Pfam PPR repeat 211 236 IPR002885 -
Tpr2g0928 652 Pfam PPR repeat 176 204 IPR002885 -
Tpr2g0928 652 Pfam PPR repeat 485 513 IPR002885 -
Tpr2g0928 652 Pfam PPR repeat 247 275 IPR002885 -
Tpr2g0928 652 PANTHER OS01G0167750 PROTEIN 7 649 IPR044175 -
Tpr2g0928 652 TIGRFAM PPR: pentatricopeptide repeat domain 247 278 IPR002885 -
Tpr2g0928 652 TIGRFAM PPR: pentatricopeptide repeat domain 176 209 IPR002885 -
Tpr2g0928 652 TIGRFAM PPR: pentatricopeptide repeat domain 555 586 IPR002885 -
Tpr2g0928 652 TIGRFAM PPR: pentatricopeptide repeat domain 485 517 IPR002885 -
Tpr2g0928 652 TIGRFAM PPR: pentatricopeptide repeat domain 211 240 IPR002885 -
Tpr2g0928 652 Gene3D Tetratricopeptide repeat domain 369 478 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g0928 488 616 Glycosyltransferase AT1G05670 27.907 1.80e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g0928 - - cam:101514749 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0928 2 11256524 11262100 Tpr2g0928 2 11256524 11262100 ECH