Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4513 ATGAGGATCCGAAAGAGGAAAATACCTTTCTCTCTTTTACCGGTGACTTTATCAGATCCCAACATGATCAACCGGTCACCGGTGGTGGTGCAACTCAACGATGATACAACCACTTCACCAAATCTTTCTTGCACTCATGACATGGCTACTGCACTATTATCACTCTCAGATCATCCTCAGCCGTCTGATCAATCACTCCCACCGATCGGGAAACCAACCAACGGCTGTGATGATCCCATAAGGCAGCACAATAAGCAAGATGTTTTGGAAGAAGATGGGAGAGGGCAAGTTAAGGAAGAGGGGCATAAGGGTAATGATACCAGGAAAGGTAGCAACTTGGGTGCACAAATTTCAACCGAGGTTTTCTCACCTTCAAGCTCTTCTAGTTATAAACAAGATTGGAAATGCAATGAGGGAGAGAAAACTTTTCCTCTAAAGAAACGGAGAGGGAGCTTTGCGAATAGCAATGATGATGACAATAATAGTAAGATGAGGAAGACGAAGAAGAAATGTTATGATAGTTACGATTTTGATGAAGAAAACGAAGATACTAAAGAAGTGGTTAGAGAAACAAAACAAAAGAAGAAGGTAAGAGGTGGTGCACTTATGGAAGGTTCGCGGTGCAGTCGCGTTAATGGAAGAGGATGGAGGTGTTGTCAACCAACACTAGTTGGTTATTCACTATGTGAACATCATTTGGGGAAAGGAAGATTGAGAAGCATGGCAAGTGTAAGAAATAAGTCTCTTGCTGCTTCAACAAGTTCTAAGAACCATATGCCAATTTGTCAAAATGAGTCTCCACCTATCGAAAAACAAACCGAGTTTGATAGCAAAGACAATGATGAGAAGAAGCCATCGACAATCGGGAAGAAGAGGATGAAGCTTGGATTGGTGAAAGCACGATCGATGAGTAGTTTGTTGGGACAAACAAACAATGATCTTGCCGTAGTTGAGAATAACAAGAGTGCAAGTCCAACTTCTTAA 984 0.4187 MRIRKRKIPFSLLPVTLSDPNMINRSPVVVQLNDDTTTSPNLSCTHDMATALLSLSDHPQPSDQSLPPIGKPTNGCDDPIRQHNKQDVLEEDGRGQVKEEGHKGNDTRKGSNLGAQISTEVFSPSSSSSYKQDWKCNEGEKTFPLKKRRGSFANSNDDDNNSKMRKTKKKCYDSYDFDEENEDTKEVVRETKQKKKVRGGALMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMASVRNKSLAASTSSKNHMPICQNESPPIEKQTEFDSKDNDEKKPSTIGKKRMKLGLVKARSMSSLLGQTNNDLAVVENNKSASPTS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4513 327 MobiDBLite consensus disorder prediction 86 134 - -
Tpr1g4513 327 MobiDBLite consensus disorder prediction 86 107 - -
Tpr1g4513 327 PANTHER OS02G0773600 PROTEIN 44 320 - -
Tpr1g4513 327 MobiDBLite consensus disorder prediction 109 133 - -
Tpr1g4513 327 Pfam WRC 204 244 IPR014977 -
Tpr1g4513 327 PANTHER - 44 320 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tpr1g4513 327 MobiDBLite consensus disorder prediction 271 289 - -
Tpr1g4513 327 MobiDBLite consensus disorder prediction 248 291 - -
Tpr1g4513 327 MobiDBLite consensus disorder prediction 248 270 - -
Tpr1g4513 327 ProSiteProfiles WRC domain profile. 202 246 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4513 Tpr-Chr1 53363209 53365924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4513 - - gmx:102665471 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4513 1 53363209 53365924 Tpr1g4513 1 53363209 53365924 ECH
Tpr6g1619 6 17348356 17350743 Tpr1g4513 1 53363209 53365924 PCT