Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4506 ATGGCGAAATACGGCGAAGGTGACAAACGTTGGATCGTAGAAGACAGACCAGACGGAACAAACGTCCATAACTGGCACTGGTCAGAAACGAATTGTCTAGAATGGTCTAGAACCTTCTTCAATAATCTCTTCAACAACCTCAAAATCCTCGACGGTGAAGGTGGATTTTACATCGCCGTCAAAAAAGTTGAAAAAGTTGATGGTGAAGCTTATGTTAATGTTCGTAAGGGGAAGATTATTCCTGGATATGAAATCAGTGTGTTGATTTCATGGGAAGGTGAAGCGAGAGATTCTGATGGGAAGATCTTGCATAAGGTTAGTGGTAATGTTGAGATTCCTTATATTTCTGATGAGAATGCTGATGAGGATCCTGAAATTAGGGTTAGTGTTAAAGATGAAGGGAAAATTGGGAAGACTATGAAGGAAGCGGTTATTGTGAAAGGGAAGGCTTTGATTTTGGAGAAAGTTAGGGTTTGGGTTGAGAGTATGTCCAGAGGAGGACCGGTTAAAGATGAGCTGGAGACTAAGAAGGTTCCGCCCCAGAAGGCGGCGAAGAAGAAGGAAGAGGAAGCTGTTTTTGCGGTTACGGCGGCGAAGGAGAAGGAAAAGAAGAAGGAAGAAGGGAAGAAGGGTTGTAAAACGATTAGATTGAATGAGAAGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATAATGATGGATGAGAATAGATGGAAGGGTTTTACTCAGAGTAATGCAAGGATTAGTAAAGAGGTTGGTGGTGAGATTAGTATTTTTGATGGGTCTGTTACAGGGGCAAATTTGGAATTGGAGGAAGGGAAGTTGATTGTTCAGAGATGGAGATTTGGAAGCTGGCCAGATGGAATGCAATCAATGGTGAGAATTGTGTTTGAGGAGCCAGAATCCGGAGTTACGGTTGTGAAGCTAACACACACTGATGTGCCTGAAGAAGACAGATATGGGAATGCGACTGTCGTAGAGAATACAGAAAGGGGATGGAGAGATCTCATTTTCCAAAGGATTCGGTCTGTGTTTGGTTTTGGAATGTGA 1050 0.4257 MAKYGEGDKRWIVEDRPDGTNVHNWHWSETNCLEWSRTFFNNLFNNLKILDGEGGFYIAVKKVEKVDGEAYVNVRKGKIIPGYEISVLISWEGEARDSDGKILHKVSGNVEIPYISDENADEDPEIRVSVKDEGKIGKTMKEAVIVKGKALILEKVRVWVESMSRGGPVKDELETKKVPPQKAAKKKEEEAVFAVTAAKEKEKKKEEGKKGCKTIRLNEKFNCRAKDLFEIMMDENRWKGFTQSNARISKEVGGEISIFDGSVTGANLELEEGKLIVQRWRFGSWPDGMQSMVRIVFEEPESGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRSVFGFGM* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4506 349 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 164 IPR036338 -
Tpr1g4506 349 Pfam Activator of Hsp90 ATPase homolog 1-like protein 226 344 IPR013538 -
Tpr1g4506 349 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 349 - -
Tpr1g4506 349 CDD SRPBCC_Aha1 214 347 - -
Tpr1g4506 349 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Tpr1g4506 349 Gene3D - 18 176 IPR036338 -
Tpr1g4506 349 SUPERFAMILY Bet v1-like 214 348 - -
Tpr1g4506 349 Pfam Activator of Hsp90 ATPase, N-terminal 29 164 IPR015310 GO:0001671|GO:0051087
Tpr1g4506 349 Gene3D - 211 348 IPR023393 -
Tpr1g4506 349 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 349 IPR039981 GO:0001671|GO:0051879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4506 Tpr-Chr1 53237603 53240817 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4506 - - tcc:18599135 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4506 1 53237603 53240817 Tpr1g4506 1 53237603 53240817 ECH
Tpr6g3632 6 39551498 39554441 Tpr1g4506 1 53237603 53240817 PCT