Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4329 ATGAGGGCCAACAAATCAACTTCTTTTCACCTTCCTGCAGGAATAGTTAAAACAACACTGGCAGTGTTGGTTGTTGGATTTCTAGCATGGGCTTATCAAGTTTCTCAACCTCCTCCTCCCAAGATATGTGGCTCTCCTAATGGACCACCTATAACGGCGCCAAGAATCAAACTAAGAGATGGAAGACATTTGGCATACAAAGAGCACGGTGTTCCAAAAGACGACTCAAAGTATAAAATCATCTTTGTCCACGGTTTCACCAGTTGTAGACATGACGCTGTGGTTGCCGACACCCTATCACCTGATATTGTGAAGGAATTGGGGATCTACGTTGTATCTTTCGACAGACCTGGTTATGGAGAAAGTGATCCTGATCCAAATCGTACTTTAAAGAGCATTGCTTTGGATATCGAGGAGCTTGCTGATCAATTGGGATTGGGATCCAAATTCTACGTGGTTGGTTATTCCATGGGTGGGCAAATTACTTGGAACTGCCTTAAGTATATACCTCACAGGCTGGCAGGTATAGCGCTCTTAGCCCCAGTCGTCAACTACTGGTGGCCTGGTTTTCCTGCAAACATAACTGCAGAAGCCTATTCCCAAATGAAATTAGAAGACCAATGGGCACTTCGTGTTGCTCACTACACGCCATGGCTAACGTACTGGTGGAACACTCAAAGATGGTTCCCGATTTGTAGCGCAATTTCTCGTAGTCTACATAACTTTTTGAAACAAGACAAAGAGCTTTTAACTAAGTTGTTGGATAATAAAGATAATTATGTGGCGCAAGTAAGACAGCAAGGGGAATATGAATCTGTCCACCGCGACTTAAATATTGCATATGGAAGCTGGGAATATACTCCATTGGATCTTCAAAATCCATTTCCAAACAATGAAGGTTCTGTTCATCTTTGGCAAGGAGATGATGATTTATTTGTTAATGTTGCACAACAACGATTCATCGCACAAAACCTTCCATGGATTCACTATCACGAACTTACAGGTTCGGGTCACCTCTTTCCTCACGCCGATGGCATGAGTGAGACTATCATTAAGTCTCTTTTAGGTGTGAAGTAG 1077 0.428 MRANKSTSFHLPAGIVKTTLAVLVVGFLAWAYQVSQPPPPKICGSPNGPPITAPRIKLRDGRHLAYKEHGVPKDDSKYKIIFVHGFTSCRHDAVVADTLSPDIVKELGIYVVSFDRPGYGESDPDPNRTLKSIALDIEELADQLGLGSKFYVVGYSMGGQITWNCLKYIPHRLAGIALLAPVVNYWWPGFPANITAEAYSQMKLEDQWALRVAHYTPWLTYWWNTQRWFPICSAISRSLHNFLKQDKELLTKLLDNKDNYVAQVRQQGEYESVHRDLNIAYGSWEYTPLDLQNPFPNNEGSVHLWQGDDDLFVNVAQQRFIAQNLPWIHYHELTGSGHLFPHADGMSETIIKSLLGVK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4329 358 SUPERFAMILY alpha/beta-Hydrolases 42 346 IPR029058 -
Tpr1g4329 358 Gene3D alpha/beta hydrolase 44 355 IPR029058 -
Tpr1g4329 358 Pfam Alpha/beta hydrolase family 80 344 IPR000073 -
Tpr1g4329 358 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 2 355 - -
Tpr1g4329 358 PANTHER PUTATIVE-RELATED 2 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4329 Tpr-Chr1 50495048 50502466 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4329 - - gmx:100500491 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4327 1 50461417 50468670 Tpr1g4329 1 50495048 50502466 ECH
Tpr7g3844 7 47710974 47713631 Tpr1g4329 1 50495048 50502466 ECH
Tpr4g1518 4 14937226 14941648 Tpr1g4329 1 50495048 50502466 ECH
Tpr1g4329 1 50495048 50502466 Tpr1g4329 1 50495048 50502466 ECH