Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4226 ATGAAGGGTGAAACAGTAAATGTGACATGGCTTGGTGGTTTTTGGCCAGTTCCACGCAAGATTGGTTCAGAAGACAAAGATGGAATTGGAATTATGGCATTTGAAGTTGCAGGGTTGATGTCAAAGGTTGTTAATTTTTGGCATTCTTTGAGTGATAATGAAGTAATGAATCTAAGAGAATGGATAGTAAATTCAGTTGGTGTTAAAATGCTTGTTTCTGATGATGAATATTTCTTAATGGAACTTACATGGAATGAGATTCTTCATAATTTTCAATCTATATCACAATCTGTTGCAAGGTTAGGTAAAAGGTGTAAGGATCCAATATATCATAGTTATGAAAGTTTTGTTCATAACCCATCTCAAAATTATGTTCAATGGTCAGGTTGGGAATATAGATTGAAAAAGATGGAGAAAAAAGTGAAGAAAATGGAAAGATTTGTTACTTCTATGTCACTTTTGTCTCAAGAGCTTGAGGTGTTAAAAGAGTGTGAACAAACTTTAAGGAGAATGAAGTTAAATCGCGACATGGTTGATAAGGCAAAATTGGTCGAGTTTCAGAAGAAGGTTATGTGGCAAAGGCAACAAGTGCAAAATGTAAGAGATTTGTCTCCTTGGAGTAGAAGTTATGATTATATTGTTAGGCTGTTAGCAAGATCATTGTGCACAATTCTTGAGAGAATCATATTTGTGTTTGGAAATAGTCATTTACCAATTGAAAACCAACAAAATGATTCCTCAAGAACAATGAACTATACTAACAATAGTCTCGCGCGCAACAATTCTTTCCCGGCAGCTCTCAATGTCATGCAATCTTCGGTTCATCCTTCTGAGACGAATCTAAACGAATTTTTTTCGGGACCTATTGGAAGAAAGAACAAGAGCAAGAAAAAGAAGAAAGTGCAACAAGTGCTTCAATCACAAGATTCATGTGAAAAGCTTCTTTCTTCAGAAGGAAAGCAATTGAAGTATATTGGATCCTTCAAAGGTTGCATATCAATTCAAAACGATTCCGATTACCATGTAGTACAGAGTTGTATTCCATCTAACGGTGGTTCTACGCGGAAAAACATCGATGTGAAAACAAAACCGGTAGTTAATAAATCATCTTTCTTCCATAGAAGTAGAGTTTATTTTAAACTATCTCTCAAGGAAAAGTTAAAGCCGGTTCCATCAACCCTCGGTGAAGCAGCTTTAGCTCTACATTATGCAAATGTGATTGTATTAATAGAGAAGATCGTGTCATCACCTCGCGCGAACATGATCGATGTTCAAACGAGAGACAATCTTTACAATAGGCTACCAACGACTATAAGAACAGCTCTAAGGAGTAAGCTTAAATGGTATGCCAAAGGTAAGCTTGAAACAGAATGGAATGTGGTACTGACACAGATATTGGAGTGGTTAGCTCCACTTGCACACAATATGGTTAAGTGGCATTGTGAGAGGAATTTTGAGAAGGAATATACTAGTTTGAAAGCAAATGTTTTACTTGTACAGACTCTTTACTTTGCAAATCAAGCAAAAACTGAAGCTGCAATGGTTGAACTCCTTGTTGGTCTTCATTATGTATGCAGGATTGATAAAAAGCAGGTTCTAGATCGTTTAAGAAGGAATTAG 1620 0.3611 MKGETVNVTWLGGFWPVPRKIGSEDKDGIGIMAFEVAGLMSKVVNFWHSLSDNEVMNLREWIVNSVGVKMLVSDDEYFLMELTWNEILHNFQSISQSVARLGKRCKDPIYHSYESFVHNPSQNYVQWSGWEYRLKKMEKKVKKMERFVTSMSLLSQELEVLKECEQTLRRMKLNRDMVDKAKLVEFQKKVMWQRQQVQNVRDLSPWSRSYDYIVRLLARSLCTILERIIFVFGNSHLPIENQQNDSSRTMNYTNNSLARNNSFPAALNVMQSSVHPSETNLNEFFSGPIGRKNKSKKKKKVQQVLQSQDSCEKLLSSEGKQLKYIGSFKGCISIQNDSDYHVVQSCIPSNGGSTRKNIDVKTKPVVNKSSFFHRSRVYFKLSLKEKLKPVPSTLGEAALALHYANVIVLIEKIVSSPRANMIDVQTRDNLYNRLPTTIRTALRSKLKWYAKGKLETEWNVVLTQILEWLAPLAHNMVKWHCERNFEKEYTSLKANVLLVQTLYFANQAKTEAAMVELLVGLHYVCRIDKKQVLDRLRRN* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4226 539 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Tpr1g4226 539 Coils Coil 154 174 - -
Tpr1g4226 539 Pfam Protein of unknown function (DUF668) 393 478 IPR007700 GO:0045927
Tpr1g4226 539 PANTHER BNAC09G50660D PROTEIN 5 531 - -
Tpr1g4226 539 PANTHER PLANT/T32M21-140 PROTEIN 5 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4226 Tpr-Chr1 49141082 49143457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4226 - - gmx:100804666 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g4226 1 49141082 49143457 Tpr1g4226 1 49141082 49143457 ECH
Tpr6g0790 6 6719172 6721856 Tpr1g4226 1 49141082 49143457 PCT