Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g4130 ATGCTTAGTTCTTTTTTTGGGAAGGTACAAAAGAGTTTATTAGTCTTTGTACCAAGAAAGCATGCATTGAGCTACTGGAATGAAGATGAAGCCACAACCACAACTGAGCTTGCTGATGTTGTAATGAAAGGTTACTTTGCTGTTCTTGCAAGGAAGGGTGAAGAAACTAGAAGGTTTATTGTTGGGTTGGATTACTTAACTGATCCTGCTTTTTTGGGATTGCTTGATGAAGCTTGGGAGGAGTATGGTTTCAGACAAAAAGGAACTCTTGTTGTTCCGTGTCGTCCGATAGAATTACAGAACATTCTAGATGGTCGGAAAATATAG 327 0.3914 MLSSFFGKVQKSLLVFVPRKHALSYWNEDEATTTTELADVVMKGYFAVLARKGEETRRFIVGLDYLTDPAFLGLLDEAWEEYGFRQKGTLVVPCRPIELQNILDGRKI* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g4130 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 108 IPR003676 GO:0009733
Tpr1g4130 108 Pfam Auxin responsive protein 32 103 IPR003676 GO:0009733
Tpr1g4130 108 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g4130 Tpr-Chr1 47586414 47586740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g4130 23 95 Calmodulin-binding Proteins AT3G43120 42.667 2.86e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g4130 - K14488 gmx:100818734 129.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g0889 6 7769559 7770146 Tpr1g4130 1 47586414 47586740 PCT