Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3880 ATGGGATCAGTTTGCTCAGCTGGTAAGGAAGAGAAAAATAAAAATAATGAGATTCAAGAAGTTTCTGTGGGGAAATTTAACAAGTTAAAGAGCTTTGTTAACAGAAATGGAAATTGTTATTCAAATTCAAAGGTTAATAGTGATCGTGGTGAAAATCAAAAGAAACAAAAATCTGGATTTTCCAGGGAATTCAAACTAGTCAATGATACCACCAACCTCAATGTAAAAGGGAGAAAACAGGTCTCCCAAAGAGGGTCCTTTCTAGGAAGAGCTGGTGAGAAGGCAGTGGAAGTTCTAGACACACTAGGAAGTAGCATGCCCAAGATAAGCACTAGTGATGGTTTTATCACTAGCATGGCTCCTAGAAGAAATAAAATATCTATGTTGGCATTTGAAGTAGCTAATACAATTACTAGAGGATCAACTTTGTTTCATTCACTGTCCGAAGAAAACATTCAGTTACTTAAACATGAGATTTTACGATCCGAAGGGGTACAAAAGCTGGTTTCTACTGATACAAAGGAGTTGTTAAGTCTTATTGGGGATGACAAAAGGGAAGAATTCAATGTCTTCTCGCGAGAAGTAGCTAGATTTGGTAATACATGTAAAGATCCTCAGTGGCATAACCTCGATCGATATTTTTCACGATTAGATTTGGATGCCTTGAGCAACAAACAACATAGGATAGAAGCAGAAAAGACAATGCAGGACTTGTCCTATCTAGCTCAGAATACTGCTGAATTATACCATGAAATGAATGCATTGGACCGTTTTCAACAAGATTATAACCAAAAGGTTAAGGAGTTGGAGTTCTTAAACCTTCCTCTCAACGGGGAAGGTCTCGCAGCTTTTCATAGTGAGATTAAGCATCAAAGAAAGCTTGTAAAGAGCTTACAAAGGAAATCCCTTTGGTCAAAAAATTTGGAGGAGATCGTTGAAAAGCTTGTCGATATTGCCACACATACACATCAAGCAATATTGGAATTCCTTGGAAAAAATGATACAATCGCAGTAAAAAATCATAAGGGACCTCAAAGACTCGGCGAAGCTGGTCTTGCACTGCACTATGCTAACATTATCAATCAGATAAATGTTATAGCATCACGTCCAACCATTCTTCCACCAAATATGAGAGACACATTGTATAAAGGTTTGCCCAATAATATTAAGAATTCCCTTCCTTCGCGGTTGCAAAACGATGATGTCACAAAAGAGCTCTCCATTGCTGAAGTCAAAGCTGAAATGGATATGATTCTCCAGTGGCTTACTCCATTTGCCACAAATACGACCAAAGCACACCAAGGTTTTGGATGGGTTGGTGAATGGGCAAATGCAAGTGCTAATGAGTTTGGAGAAAATACAACACCCAAAGAAAGCAACCTTATTCGTCTTCATACACTTCATTACGTCGAAAAACAAAAGATAGATTTTCACATCCTCGAACTATTGGTTCGACTTCACCATTTGGTTACCTATGTAAGATACAGACACAATCCCACAAGACCAATGCCTAGTACAAGAACTTCTTCTCCCAACAAAGGACTTCATTTTCAATCAAAGATGTTACAATTCATATCCGTGTCTCAATTATCTGAAGAGGATAGGAGGTTGTTGGAAGAGGTAACTACAAGGAGATGGATTCCAGGTATAAGCAAAAGTGAGAATCTTGCTGGGGCCAAGAAAACAGAAAACATGGCGTGGCATTTTAGTAACAGTGTTGGGAATTCACCATCTAAGTGGTTCTTTACTACAAAATTGAGCTTGGATGTTATGGATGGCCTATAA 1785 0.3838 MGSVCSAGKEEKNKNNEIQEVSVGKFNKLKSFVNRNGNCYSNSKVNSDRGENQKKQKSGFSREFKLVNDTTNLNVKGRKQVSQRGSFLGRAGEKAVEVLDTLGSSMPKISTSDGFITSMAPRRNKISMLAFEVANTITRGSTLFHSLSEENIQLLKHEILRSEGVQKLVSTDTKELLSLIGDDKREEFNVFSREVARFGNTCKDPQWHNLDRYFSRLDLDALSNKQHRIEAEKTMQDLSYLAQNTAELYHEMNALDRFQQDYNQKVKELEFLNLPLNGEGLAAFHSEIKHQRKLVKSLQRKSLWSKNLEEIVEKLVDIATHTHQAILEFLGKNDTIAVKNHKGPQRLGEAGLALHYANIINQINVIASRPTILPPNMRDTLYKGLPNNIKNSLPSRLQNDDVTKELSIAEVKAEMDMILQWLTPFATNTTKAHQGFGWVGEWANASANEFGENTTPKESNLIRLHTLHYVEKQKIDFHILELLVRLHHLVTYVRYRHNPTRPMPSTRTSSPNKGLHFQSKMLQFISVSQLSEEDRRLLEEVTTRRWIPGISKSENLAGAKKTENMAWHFSNSVGNSPSKWFFTTKLSLDVMDGL* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3880 594 Pfam Domain of unknown function (DUF3475) 129 184 IPR021864 GO:0045927
Tpr1g3880 594 Pfam Protein of unknown function (DUF668) 346 431 IPR007700 GO:0045927
Tpr1g3880 594 MobiDBLite consensus disorder prediction 40 61 - -
Tpr1g3880 594 PANTHER OS01G0873900 PROTEIN 1 594 IPR045021 GO:0045927
Tpr1g3880 594 PANTHER DUF668 FAMILY PROTEIN 1 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3880 Tpr-Chr1 42923688 42928822 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3880 - - gmx:100785193 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3880 1 42923688 42928822 Tpr1g3880 1 42923688 42928822 ECH