Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3795 ATGGAAACCGTAGTGGAAACCCTTCACATGAACAAAGGAGCTGGCGAAACTAGCTATGCCATGAACTCCTTCGTCCAGAGGAAGATAATATCATTGACAAATCAAGCAACAGAGAAAGCTATTATGGAAATTTTATGCTCAAAGAGAAGGCCAATAACAAAGATGGGAATTGCTGACTTAGGTTGTTCATCAGGACCTAATGCCTTAAGGGTAATTTCGGAAATAGTTGAAGCTATAAATGCAACCTCAAGCTTGTTGAATCATCAAGCACCAAAGGAACTAATGTTTTATATGAATGATCTTTTCACCAATGATTTCAACAATATTTTTGCTTCTTTACCATCTTTCCACAAAAAAATAAGGCAACAAAAGAGTAATTACAATAATGGGAATATTGGTTCTAATTGTTTTGTTTCTGCTGTACCGGGTAGTTTCTATGGTAGACTCTTTCCAACTAAATCCCTCCATTTTGTGCACTCTTCTTCAAGTCTCCATTGGCTTTCTCAGGTTCCTTGTGGTTTGGAGGATGAAAGGGGGAGAGGGTTGAACAAAGGAAAACTTTACATATCAAAGAGCAGTCCCAATTGTGTATTAGAAGCTTATTTACAACAATTTCAAAATAATTTTTCACAGTTCCTTGAGTCACGTTCTCAAGAAATGATAAATGGAGGACTCATGGTCCTTTCTTTTATGGGTAGGAAATCCAAAGACCCAACATCAGCCAATTGTTGCTATCAATGGGAACTTTTAGCCAATGCTCTTATGACTATGGTTTCAGAGGGTCTTGTTAAAGAAGAAGATGTGGATTCTTTTAATGCTCCTTACTATGCACCATGTTTTGAAGAATTGAAGATAGAAATTGAGAAAGAAGGGTCATTCATGGTGAATTCTTATGAAACTTATGAAGTTGATTGGGATGATGGGATGGAATTGCAAAGTGATGATAATGATTTATTAGGAAGGAAGATGTCAAGTGGAGAACGTGTTGCAAAAACCATAAGGGCTGTTGTTGAGTCAATGTTGGAATCTCATTTTGGGAGTCATATAATGGATGATTTGTTTCAAAGGTATGCTAAACTTGTGGAGGATCATTTGTCCAAGACTAGGACCAAATACATCAATTTGGTTATTTCTCTTGTCAAGAGACAATGA 1152 0.3672 METVVETLHMNKGAGETSYAMNSFVQRKIISLTNQATEKAIMEILCSKRRPITKMGIADLGCSSGPNALRVISEIVEAINATSSLLNHQAPKELMFYMNDLFTNDFNNIFASLPSFHKKIRQQKSNYNNGNIGSNCFVSAVPGSFYGRLFPTKSLHFVHSSSSLHWLSQVPCGLEDERGRGLNKGKLYISKSSPNCVLEAYLQQFQNNFSQFLESRSQEMINGGLMVLSFMGRKSKDPTSANCCYQWELLANALMTMVSEGLVKEEDVDSFNAPYYAPCFEELKIEIEKEGSFMVNSYETYEVDWDDGMELQSDDNDLLGRKMSSGERVAKTIRAVVESMLESHFGSHIMDDLFQRYAKLVEDHLSKTRTKYINLVISLVKRQ* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3795 383 Gene3D Vaccinia Virus protein VP39 22 369 IPR029063 -
Tpr1g3795 383 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 377 IPR005299 GO:0008168
Tpr1g3795 383 Gene3D - 8 368 IPR042086 -
Tpr1g3795 383 PANTHER JASMONATE O-METHYLTRANSFERASE 8 377 - -
Tpr1g3795 383 Pfam SAM dependent carboxyl methyltransferase 40 381 IPR005299 GO:0008168
Tpr1g3795 383 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 382 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3795 Tpr-Chr1 42004113 42007588 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3795 K08241 - gmx:100819585 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3795 1 42004113 42007588 Tpr1g3795 1 42004113 42007588 ECH