Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3772 ATGCCTTTCTCTAGAAGCATTCCAATCCCAACCTCTATTAGTTCTCCAGAACCGCGTGCGCATTATTTAAACCTCACTTTACATTACGACAAATTCAAACCCTTTCATTCCGTTTCACTCTCTCTCCGTAACCGCATTCCTTCTAGAATCTTCTCCGATGCTCATTCTCCGTCTTTTCTCTCCTTCTCGCCGCCGCCTCACTCTTCCTCCTCCGTCGCAGGAGATAGTCAGTTGAAAGCTCAATTTTCAAGGGATGAGATCCGCATTGATGCATGTGGTGAAAGTTCTGAACATCTGCGAGAATGGTTATCGTTTCCTGATTATGGACCTAAAACTGATATAGGAATGCGGATCTTCTGTAACCGGCCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAATACAGGCCTGAAACTTTTGAATCCCTTGCTTATCAACACACTGTTAAAAAGCTGGTTTATGATTTGAAATACCCTAGCGAGTTACTGAGTTGGTCATTTGATCCAAATTACATGGTTAGAGGTTTGGTTCTTGACAAAAAGAGAGGCAACATCTTGAAGATGGATTGCCACAAATATGTTAAAGTAGCTTATCATGGATTTAAAGAGTTATCAAAAGAAGATAAATTTGTGACCTACGGAAATACGTTAGTATGTGATCCTTTTGATGGGCCTGATTATGCTCTAATTGATACACTCTTTTCTCTTGCGGAAGCCTACTTGTTTGCACAACTGGTTGATTTTAAGGACAGAAATCCTGGAAAGCTTCCAATGTCTATTGATTATGCCTGTCTCTATAAGGATGTTCGTCATGCTGTAGATTTGTGCCACCGAGATGGAACATTGAAGCAACAGGTTGCAAAAGATCCCGGAAGGTATATCAATGAAGACACCTCAATAGTTCCCATGCTTAAAATGCTTAGAGATTCTGGACGAGCTACATTTTTGGTGACAAACAGTTTATGGGACTATACGAACGTTGTCATGAATTTCCTCTGTAGATCTAGTGGAGTAAACGACAGTACCAATTTGGACTGGCTTCAATACTTTGATGTCATAATCACTGGAAGTGCAAAGCCAAGCTTTTTTCTTGAGGGAAATCATGCTAACCTGTTTGAGGTTGAGCCTGAGAGTGGAAAGTTACTTAACACAGATAATGGCTCTCCTATGCCTCAGGTGGGTAATATATCAGCAGGGTTATTGATGAAAGAAAAGGACCGTAAGGTTTTCCAGGGAGGCAGCGTCAATCACTTACATAATCTACTTTCAATAGAATCAAGTTCACAGGTTCTATATGTCGGAGATCATATTTATGGAGATATACTACGCAGCAAAAAGGTTCTCGGATGGAGAACAATGTTAGTAATCCCAGAGCTTGAGAGGGAGGTTCAAGTCCTCTCGGAATTAAGGGATTTTCGCAAGGATCTTCAAATTTTGAGGAGCAAGGATGATTGCATTGCAGATAAAATGCACCATTTGAATCGGTCTCTCAAGTTAGAGAATCCAGATGACCATACCAAGCAGAAATTGAATTCAAAACTTGATGAATTGAAGCTTGAAAGAGAGATAGTGCTGTCGAGTCATCAAGAAGCGCTAAGAAAATTACACCAAAAGTTTCATGAGCCTTGGGGCCAGCTGATGAAGACTGGTTATCAGAACTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCTTGTCTTTATACAAGCCAAGTATCTAACTTGGGCTTGTTATCTTTAGACAAGTACTATAGACCCAGTGAAGATTTTATGCAACATGAATTTGGCATTTTGGAAAGCTAA 1824 0.4046 MPFSRSIPIPTSISSPEPRAHYLNLTLHYDKFKPFHSVSLSLRNRIPSRIFSDAHSPSFLSFSPPPHSSSSVAGDSQLKAQFSRDEIRIDACGESSEHLREWLSFPDYGPKTDIGMRIFCNRPLNMKNIVAVGFDMDYTLAQYRPETFESLAYQHTVKKLVYDLKYPSELLSWSFDPNYMVRGLVLDKKRGNILKMDCHKYVKVAYHGFKELSKEDKFVTYGNTLVCDPFDGPDYALIDTLFSLAEAYLFAQLVDFKDRNPGKLPMSIDYACLYKDVRHAVDLCHRDGTLKQQVAKDPGRYINEDTSIVPMLKMLRDSGRATFLVTNSLWDYTNVVMNFLCRSSGVNDSTNLDWLQYFDVIITGSAKPSFFLEGNHANLFEVEPESGKLLNTDNGSPMPQVGNISAGLLMKEKDRKVFQGGSVNHLHNLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEREVQVLSELRDFRKDLQILRSKDDCIADKMHHLNRSLKLENPDDHTKQKLNSKLDELKLEREIVLSSHQEALRKLHQKFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLGLLSLDKYYRPSEDFMQHEFGILES* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3772 607 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 118 483 IPR008380 -
Tpr1g3772 607 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 20 607 IPR008380 -
Tpr1g3772 607 SUPERFAMILY HAD-like 116 603 IPR036412 -
Tpr1g3772 607 Pfam 5' nucleotidase family 118 602 IPR008380 -
Tpr1g3772 607 Coils Coil 515 535 - -
Tpr1g3772 607 PIRSF NT5C2 100 607 IPR016695 -
Tpr1g3772 607 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 20 607 - -
Tpr1g3772 607 CDD HAD_cN-II 119 577 - -
Tpr1g3772 607 Gene3D - 280 491 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3772 Tpr-Chr1 41805820 41813673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3772 - - gmx:100814787 860.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3772 1 41805820 41813673 Tpr1g3772 1 41805820 41813673 ECH