Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3756 ATGAATCTGAATTACTCTGTTTATAAAATGCCATTCAATAATTACTTTTCGAGTTTTGGAAAATTTTTGGGGAAAGAAAGGGGATTTCAGGATTCTGCTGAAGTTCTCATTGGACAAGGGAAATTGTGGTTTGGTAGTTCTAAGTTTTTTCATTCTGTCAATAAATTAAGTTCAGATTGTGTGGAGGCGACCCTGTTTATTCGTCCTGGGGTTGCCTTAGCTGAAAGACCTGAATTTGTTGGTAAAAGGAGAACCTTGTCGGTAGTTGATACACTATCTAGAACGTTTTCGGTTCCGTCTGTATCGGGGTCTTTGATTCAGGTTTGTGGATATCACATTGATTGTGCTCTTGCTGGACCGGATAAGTATTCGGCTGGTGGAAAATTTCAGATTAAAACAATGGCTGCTCGCTTGCCTGGGTTTGGTGTTGGTGAGTGCTCTTTAGATAATTTGACTCTGAAGTGTCGTCGGGGTTTGCTGTCAACGAAGAATAATAGCAATAGTGTTTATCTGAGAGCTGGTTTGGGAAATGGTGGAAAAGTGAGCATGTGTTTGAATAACCATCAAAGGCCAGATAATGGTGCAATTTTTGGTTATTTTGTTTGTAATGTTGCAAAGAGTTGGGGTAGTTCTTGGCATCATACACAATCAGGACATAGTGACTACCATAGTTCGTCGACATCATGCAACTCTGTTGGCCCCGCTCATGATGTGCCTGTAGACACTTCTGCCCGTGAGGTGAAGCTAACAAATTCTGCAGATTCATCTGAACTGAAAACTCCTTCTGGGAAAACCCTGAAGCTGGTATCCGGATCATGCTACTTGCCTCATCCTGATAAAGAAGAAACTGGTGGAGAAGATGCTCATTTTATATGTTCTGAGGAACAAGCAGTAGGGGTGGCAGATGGTGTTGGTGGCTGGGCAGATCTTGGTGTTAATTCTGGATTTTACTCTCGCGAACTCATGTCAAATTCAGTGGATGCTATTCGGGAGGAGCCCAAAGGTTCAGTTGACCCGGCTAGGGTGCTGGAAAAAGCATACTCAAGTACAAAAGCTAAGGGTTCATCCACAGCATGCATCATTGCACTAACTGACCAGGGACTTAATGCTATTAATTTGGGAGACAGCGGGTTTATGGTTATCCGTGATGGTTGCACCATATTCAGATCTCCTGTGCAGCAACATGATTTCAATTTCACCTATCAGTTGGAATGTAGTAGCAATAGTGATTTACCTAGTTCTGGTCAGGTTTTTACAGTTGCTGTTGCTCCTGGCGATGTCATAGTTGCTGGTACGGACGGGCTGTTTGATAACTTGTACAATAATGAAATTACAGCGGTGGTGGTTCACGGCGTAAGAGCTGGCTTAAGTCCTCAGGCTACAGCTCAGAAGATAGCTGCTTTGGCACGTCAACGGGCACTGGATAAAAACAGGCAGACTCCTTTCTCAACCGCTGCTCAAGATGCTGGATTTCGTTACTATGGTGGCAAGCTTGATGATACAACAGTTGTAGTTTCATATATTACTGGTTCTGGAGAAGCGTAA 1545 0.4317 MNLNYSVYKMPFNNYFSSFGKFLGKERGFQDSAEVLIGQGKLWFGSSKFFHSVNKLSSDCVEATLFIRPGVALAERPEFVGKRRTLSVVDTLSRTFSVPSVSGSLIQVCGYHIDCALAGPDKYSAGGKFQIKTMAARLPGFGVGECSLDNLTLKCRRGLLSTKNNSNSVYLRAGLGNGGKVSMCLNNHQRPDNGAIFGYFVCNVAKSWGSSWHHTQSGHSDYHSSSTSCNSVGPAHDVPVDTSAREVKLTNSADSSELKTPSGKTLKLVSGSCYLPHPDKEETGGEDAHFICSEEQAVGVADGVGGWADLGVNSGFYSRELMSNSVDAIREEPKGSVDPARVLEKAYSSTKAKGSSTACIIALTDQGLNAINLGDSGFMVIRDGCTIFRSPVQQHDFNFTYQLECSSNSDLPSSGQVFTVAVAPGDVIVAGTDGLFDNLYNNEITAVVVHGVRAGLSPQATAQKIAALARQRALDKNRQTPFSTAAQDAGFRYYGGKLDDTTVVVSYITGSGEA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3756 514 Gene3D - 278 402 IPR036457 -
Tpr1g3756 514 SMART PP2C_SIG_2 281 508 IPR001932 -
Tpr1g3756 514 Pfam Stage II sporulation protein E (SpoIIE) 297 506 IPR001932 -
Tpr1g3756 514 PANTHER PROTEIN PHOSPHATASE 95 513 - -
Tpr1g3756 514 ProSiteProfiles PPM-type phosphatase domain profile. 272 508 IPR001932 -
Tpr1g3756 514 PANTHER PROTEIN PHOSPHATASE 2C 95 513 IPR039123 -
Tpr1g3756 514 SUPERFAMILY PP2C-like 273 505 IPR036457 -
Tpr1g3756 514 SMART PP2C_4 259 506 IPR001932 -
Tpr1g3756 514 Gene3D - 403 511 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3756 Tpr-Chr1 41647796 41653824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3756 K17508 - gmx:100805475 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3756 1 41647796 41653824 Tpr1g3756 1 41647796 41653824 ECH