Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3751 ATGGAGGAGGAGTCAGAACTCCAAGACATAAATTTAGACCCACCAAAACAACCCGACCCGATTAACGACGACCGTCCTCTTCTCAAACCCATTACAATCTTCGCTTCCGACACCGAAGAACTTGAGAGGAAATTCGCTCCATATGTACGCCACGATGTTTACGGAACAATGGGACGCAGCGAGTTACCAACCAAGGAAAAGTTTTTACTTGGCGTTGCATTGGTTACGCTTGTTCCTCTCAGAGTTGTTGCTGGAATGACGATTTTGTTATTGTATTATTTGATTTGTAGGGTTTGTACGTTTTGGTCTGTTCCTAATCGTGAAGATGAACAAGAAGATTATGCACATATGGTTGGATGGAGAAGGATTGTTATTGTTCAGTGTGGAAAAGCTTTGTCTAGGCTTATGCTTTTTGTTTTAGGGTTTTATTGGATTCGACAATCGCGTCGCCGTGAAAACCCTACCGACAATGAGGAAAACAAAGACCAGCCGGAAGAGACAGAAAGACCCGGTGTGATAATATCTAATCATGTATCATACTTGGATATTTTGTATCACGTGTCTATCGCATTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCCAAACTTCCTCTAATTGGTCTCATCAGTAAGTGTCTTGGTTGTATCTACGTTCAGCGGGAGTCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTCATCGAAATACATCTGCTCCAATTATGATGTTATTTCCAGAAGGTACAACCTCAAATGGAGAATATCTCCTTCCATTCAAGAGTGGTGGTTTTTTGGCAAGTGCACCAGTACTTCCTGTAATTTTAAATTACCATTACCAGAGATTTAGTCCTGCCTGGGATTCCATTTCCGGGGTGCGTCATGTGATTTTTCTTCTCTGTCAGTTTGTAAATTATATGGAGGTGACAGAGTTACCTACATACTATCCCTCACAAGAGGAGAAAGATGATCCCAAACTATATGCAAGTAATGTTAGAAGATTGATGGCTACTGAGGGTAATATGATACTTTCAGATATTGGGCTGGCTGAGAAACGAATATATCACTCTGCTCTTAATGGCTTGTTTTCCCAATGCTAA 1122 0.4127 MEEESELQDINLDPPKQPDPINDDRPLLKPITIFASDTEELERKFAPYVRHDVYGTMGRSELPTKEKFLLGVALVTLVPLRVVAGMTILLLYYLICRVCTFWSVPNREDEQEDYAHMVGWRRIVIVQCGKALSRLMLFVLGFYWIRQSRRRENPTDNEENKDQPEETERPGVIISNHVSYLDILYHVSIAFPSFVAKRSVAKLPLIGLISKCLGCIYVQRESKSSDFKGVSAVVTERIREAHRNTSAPIMMLFPEGTTSNGEYLLPFKSGGFLASAPVLPVILNYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVTELPTYYPSQEEKDDPKLYASNVRRLMATEGNMILSDIGLAEKRIYHSALNGLFSQC* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3751 373 MobiDBLite consensus disorder prediction 1 25 - -
Tpr1g3751 373 Pfam Acyltransferase 163 281 IPR002123 GO:0016746
Tpr1g3751 373 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 82 351 - -
Tpr1g3751 373 SMART plsc_2 171 286 IPR002123 GO:0016746
Tpr1g3751 373 CDD LPLAT_LPCAT1-like 134 360 IPR045252 GO:0008374
Tpr1g3751 373 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 13 369 - -
Tpr1g3751 373 PANTHER PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE FAMILY PROTEIN-RELATED 13 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3751 Tpr-Chr1 41594642 41599955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3751 4 372 Acyl Lipid Metabolism Gene Families AT1G80950 63.333 3.10e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3751 K13510 - gmx:100820536 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3751 1 41594642 41599955 Tpr1g3751 1 41594642 41599955 ECH