Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3592 ATGATGTCAAGAAGACCGGGTAATCCTTCTAGAAGATTCGGCGATGGCAAATCGAAATCGTCACCAGTTTTGTCAATTGGTCTTATAGTTGTGGGAGCTTTGTTTATCGTTGGTTACGTGTACAGAGGCTCAGGTGGAATTGGAAGCCGTTTAGATTCTGTTAGCAGGGTTGAAGGTGATTATTTGTGCAGTGGAGAGGTCCAACGAGCAATTCCTGTTTTGCAGAAAGCATATGGAGATAGCATGCATAAAGTTTTGCATGTTGGTCCTGATACTTGCTATGTGGTCTCTAAATTGCAAAAGGAGGATGAAACTGAAGCCTGGGGTATAGAACCGTATGATATAGAGGATGCTGATAGTACTTGCAAATCACTAATCCGTAGAGGCAATGTGCGTGTTGCTGATATCAAGTTTCCTCTTCCATATAGGCCAAAATCTTTCTCTCTTGTAATTGTTTCAGATACTCTGGATTACCTATCCCCCAGATACCTCAATAAAACTCTTCCAGATTTGGTGAGGGTATCAGCTGATGGTTTAGTGATATTTACTGGTTTTCCATCTAATCAGAAGGCCAAGGTAGCAGATGTTTCTAAATTTGGAAGAGCGGCCAAGATGAGGAGTGGATCCTGGTGGGTCAAGTTTTTCCTTCAAAACAACTTAGAGGAGAATGAAGCTATTAATAAGAAGTTTGAGCAAGCTTCAACGCAGAGTTCATTTGTTCCAAAATGCCAGATATTCCACTTGAAGTCACTCCATTGA 759 0.4137 MMSRRPGNPSRRFGDGKSKSSPVLSIGLIVVGALFIVGYVYRGSGGIGSRLDSVSRVEGDYLCSGEVQRAIPVLQKAYGDSMHKVLHVGPDTCYVVSKLQKEDETEAWGIEPYDIEDADSTCKSLIRRGNVRVADIKFPLPYRPKSFSLVIVSDTLDYLSPRYLNKTLPDLVRVSADGLVIFTGFPSNQKAKVADVSKFGRAAKMRSGSWWVKFFLQNNLEENEAINKKFEQASTQSSFVPKCQIFHLKSLH* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3592 252 Gene3D Vaccinia Virus protein VP39 63 251 IPR029063 -
Tpr1g3592 252 Coils Coil 216 236 - -
Tpr1g3592 252 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g3592 252 PANTHER PROTEIN, PUTATIVE-RELATED 2 252 - -
Tpr1g3592 252 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 2 252 IPR044689 GO:0008168|GO:0045488
Tpr1g3592 252 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 222 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3592 Tpr-Chr1 40070726 40074208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3592 K23871 - gmx:100796049 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3592 1 40070726 40074208 Tpr1g3592 1 40070726 40074208 ECH