Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3579 ATGAAGAGAGGAAAAGGTGATGATGATGATGAGAAGGTGGGACCCATGTTCCCAAGACTCCATGTCAATGACACAACGGACAAAGGAGGACCAAGAGCACCACCCAGGAATAAGATGGCACTATATGAACAGTTTAGTGTTCCCTTTCAAAGATTCAATCCTAATTCAAATTCTTCTAATTCACTTCCTCTAACACCTTCCTCCATCATGGGAAATGACCCCGACAGAAGCTGCATCTTCCCAGTTCGTTTACCTTCACAAACGAATATACATCGAGCTGAAAGTGATATTTCTCACCAATCTAATGGAGCAAACTTAGACACTTTGTCAGCACAAATTGAACAGAGAAAAGATGTGAGAAAAAAGGGTGAAGGGCATCTCCAAGTAAGCTCAAGTAGACAGAAAACAGGAATGTCTGTCGAAAGCATATTGACAGGAGAAATTATTGACAGTCCAGTGAGGCAAACCAATAAGATTCTAGATGAAGAGGATCAACATTGTTCTGTGTCAAATATATTGCATAAGGGTGATGCTTGCGTACGACAGGAATCCAATGACATTGAACATAGTGACGATCTCCTTAACTCAGAAGGAAGTGACGATCTATCCAAGATCTCCACTCTAGAAAATTTGTCAAGCCTGAAACTTTCTCCTGATGGTGTCGCACAGATATTAGGTCAACAACTTTTTTGGAAAGCAAGACGAAGAATTACCAATCAACAGAGAATGTATGCGGTCCAAGTGTTTGAGTTGCACAGACTGATAAAGGTACAACAGCTGATTGCTGGATCATCAGATCTTTTGCTTGAAGATGCTGCTGCTATTTTGGGAAAATTTCCTCTGCAGGAGTCTACTCCTAAAAGTCTCTCATTAGAAGTCGTTGTTGAACCTCAGACACAAAATCATAAACAGCAAGACCATTCTGAAAACCTAAACCGTAAATCGGAATGTTCTGCTGAAAATGGAGTAGGGAAAACATCCTTTACATACCAAAGTTATGGTAGCCACCTTTCGAATTACACCCCTTTTCCTGGAAATCCACAACAGGAAAATGCAGGTACTCAAAGTTTCAATCCGTCACCTGGACATCAGTGGTTAATTCCTGTTATGTCTCCTTCCGAGGGGCTTGTCTACAAGCCATTTCCTGGACTTGGATTTAACGGACCAGTGTATGGAGGATGTGGGCCATTTGGACAAGGTCCTCTAGATGGTACAGTCATGAATCCTACCTATGGAGTTCCAAATTTTCATCAAGCAATTGCGGTTTCACCATTCATTCCTCCAAGCAGTTATGCCTACTTCCCTCCTCATGGCGTGCCAGCAGCAATTAATCAACCAACATCAGGGTCAGTTGTTGAACAGGCGACCCAGTTTGTTGCACACGGTTCTCATGATCAAAACAATAATTCATCTTTAGTTGGAGCCGGTTTTGACACTCATAATCAAACCCCGTGTAATTTGTCAAATCAGAAATTTGGAACCATATCACATGTCACAAAATCTCGGCCAACTAGGGAGAGAGGGTTAGCTGGTAGTCCTGGTGAAAAGGCACCAGGAATTAGAATAGAGAAATCTTCTTCCTTTACAGTTCCATTGGTATCAGATGAAGTCGTTCAATCACTTGAAACAAGACAAAAACCGCAGGTAATCAGAGTTGTGCCACATAACTCACGATCTGCAACGGTATCAGCTGCTAGAATTTTTCAGTCGATCCAAGAAGAGAGAAAACAGTATGATCTAGTCTAG 1746 0.4181 MKRGKGDDDDEKVGPMFPRLHVNDTTDKGGPRAPPRNKMALYEQFSVPFQRFNPNSNSSNSLPLTPSSIMGNDPDRSCIFPVRLPSQTNIHRAESDISHQSNGANLDTLSAQIEQRKDVRKKGEGHLQVSSSRQKTGMSVESILTGEIIDSPVRQTNKILDEEDQHCSVSNILHKGDACVRQESNDIEHSDDLLNSEGSDDLSKISTLENLSSLKLSPDGVAQILGQQLFWKARRRITNQQRMYAVQVFELHRLIKVQQLIAGSSDLLLEDAAAILGKFPLQESTPKSLSLEVVVEPQTQNHKQQDHSENLNRKSECSAENGVGKTSFTYQSYGSHLSNYTPFPGNPQQENAGTQSFNPSPGHQWLIPVMSPSEGLVYKPFPGLGFNGPVYGGCGPFGQGPLDGTVMNPTYGVPNFHQAIAVSPFIPPSSYAYFPPHGVPAAINQPTSGSVVEQATQFVAHGSHDQNNNSSLVGAGFDTHNQTPCNLSNQKFGTISHVTKSRPTRERGLAGSPGEKAPGIRIEKSSSFTVPLVSDEVVQSLETRQKPQVIRVVPHNSRSATVSAARIFQSIQEERKQYDLV* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3579 581 MobiDBLite consensus disorder prediction 298 320 - -
Tpr1g3579 581 MobiDBLite consensus disorder prediction 1 17 - -
Tpr1g3579 581 MobiDBLite consensus disorder prediction 1 34 - -
Tpr1g3579 581 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 114 196 - -
Tpr1g3579 581 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 1 119 - -
Tpr1g3579 581 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 195 581 - -
Tpr1g3579 581 PANTHER PROTEIN EARLY FLOWERING 3 195 581 IPR039319 GO:2000028
Tpr1g3579 581 PANTHER PROTEIN EARLY FLOWERING 3 1 119 IPR039319 GO:2000028
Tpr1g3579 581 PANTHER PROTEIN EARLY FLOWERING 3 114 196 IPR039319 GO:2000028
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3579 Tpr-Chr1 39927834 39932474 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3579 K12125 - gmx:100818279 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3579 1 39927834 39932474 Tpr1g3579 1 39927834 39932474 ECH
Tpr7g0815 7 7191076 7196438 Tpr1g3579 1 39927834 39932474 ECH