Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3571 ATGGAGGGTGGTGAGAACATTCTAGATGCTATCTACGAAGAAGATGATGACGATAACTTGGACGACGTTGAGATGCTTGATGTTGAAGAAGGTGAATTGGTAGAAGACAATCATCAAAACGGTGTCGTTGCACAACATCATAATCTCACTGATACTAACAACAATAATAATCAAAAACCAAAACCTAATCGCAAGCGTAAATCTAAAAAGAGAAAGAAAAAGGGTTTAGGTTCTGATTCCATCGACATTAACAGGTTTGTGATAGAGACATGTCGGCGTCTGAAAGAGAAAAAGTCATACATGGTATACACAGCTGTAGGCTGCCTTGGGGTTTCTGCATTGAGTGATCTCGTCAAAGAGGTGGATGCAATACAGTCTTGTGGAGGCCAGATGACTGCCGATGGTAAGCGATTTCGCTCAGGGGGTGGTGTATTGTGGAACATCATTAAAGTTCGAGAACCAAATGCCTACAAAGAGATAATGAAAAAAGCAAGGGAGTTTGAGAAGCAATTCAGGCAGCCGTGTTTTCATCAGCCACCCATGCCAAAAAAGGAAAAGGAGGATTCTTCTCAAGGGGTGCCCTGTATATTTTCTAGTGGGAGTCAGAGCAATGTTTCCGACAATCCTTCTTGTGCAGCACAAATGGAAGACCAACCTAAACCATTAGGTTCTGAAGAGAAACGTGTTTCTGTTCATGACAGATTAAGAGTACCTGTGTCCTATGATGATGACCTGCTTGGAGCAAGCGTAGATAATGATGCAAACTTAGTACCCTAA 777 0.4208 MEGGENILDAIYEEDDDDNLDDVEMLDVEEGELVEDNHQNGVVAQHHNLTDTNNNNNQKPKPNRKRKSKKRKKKGLGSDSIDINRFVIETCRRLKEKKSYMVYTAVGCLGVSALSDLVKEVDAIQSCGGQMTADGKRFRSGGGVLWNIIKVREPNAYKEIMKKAREFEKQFRQPCFHQPPMPKKEKEDSSQGVPCIFSSGSQSNVSDNPSCAAQMEDQPKPLGSEEKRVSVHDRLRVPVSYDDDLLGASVDNDANLVP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3571 258 MobiDBLite consensus disorder prediction 46 77 - -
Tpr1g3571 258 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g3571 258 MobiDBLite consensus disorder prediction 220 234 - -
Tpr1g3571 258 Pfam Phosphorylated adapter RNA export protein, RNA-binding domain 86 166 IPR019385 -
Tpr1g3571 258 MobiDBLite consensus disorder prediction 198 234 - -
Tpr1g3571 258 MobiDBLite consensus disorder prediction 198 213 - -
Tpr1g3571 258 PANTHER CYTOSOLIC RESINIFERATOXIN BINDING PROTEIN RBP-26 1 246 IPR039047 GO:0006408
Tpr1g3571 258 Gene3D - 78 174 IPR038092 -
Tpr1g3571 258 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3571 Tpr-Chr1 39847571 39852526 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3571 K14291 - gmx:100805103 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3571 1 39847571 39852526 Tpr7g0806 7 7112147 7116308 PCT