Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3564 ATGTCTGATTCAACACCTACCGATTATGTGTCGGTGGATATCGATTCCATCTCTCCTTCTCCTAAGGAACATATTATCAGAACATCCCATGGTTCTGTCTCTGTCGCTGTGTATGGAGACCAGGACAAACCAGCTCTTATCACTTATCCTGATTTGGGTTTAAATTACGTCTCCTGCTTTCAGGGGTTATTATTTTGTCCAGAAGCATATTACTTGCTGCTCCACAATTTTTGCATATATCACATTAGTCCACCTGGGCATGAGTTGGGAGCAGCTGCAATTGATCCAGATTACCCTATTCTATCTGTAGATGACTTGGCCGATCAAATAGCTGAGGTGCTTAACTTTTTTGGTCTTAATGCAGTTATGTGTATGGGAGTAACTGCTGGGGCTTACATTCTTACCTTATTTGCTCTGAAATATCGACAACGTGTTCTTGGTTTGATACTTGTTTCTCCTCTATGTAAAGAACCATCTTGGTCTGAATGGTTGTACAACAAGGTCATGTCAAATTTACTGTACTTTTATGGCATGTGTGGGGTGGTAAAGGAAATATTGCTGCAGCGGTACTTTAGCAAGGAAATTCGCGGTGGTACTCAATTACCGGAGTCAGATATAGTCAAAGCATGCCGAAGGTCTTTGGATGAGAAGCAGAGCTTGAATGTCTGGCGGTTCCTCGAAGCTATTAATGGGAGACCTGACCTAAGTGAAGGATTGAGAAAATTACATTGCCGGTCACTAATTTTTGTTGGAGACATGTCTCCATTTCACTCAGAGGCACTCCATATCACTTCAAAGTTAGACAGACGATTCAGTGCTTTAGTTGAGGTTCAAGCATGCGGGTCAATGGTAACAGAGGAGCAGCCACATGCTATGTTAATACCAATGGAGTACTTTCTCATGGGATATGGCCTGTACAGGCCATCCAGGTTGAGTGTCAGCCCAAGAAGTCCCTTGAGTCCATCTTGCATTTCTCCCGAGCTTTTTTCACCAGAGAGTATGGGTTTGAAATTGAAACCAATAAAGACGAGAATTCCTGGGGAAATGTAG 1050 0.4276 MSDSTPTDYVSVDIDSISPSPKEHIIRTSHGSVSVAVYGDQDKPALITYPDLGLNYVSCFQGLLFCPEAYYLLLHNFCIYHISPPGHELGAAAIDPDYPILSVDDLADQIAEVLNFFGLNAVMCMGVTAGAYILTLFALKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCGVVKEILLQRYFSKEIRGGTQLPESDIVKACRRSLDEKQSLNVWRFLEAINGRPDLSEGLRKLHCRSLIFVGDMSPFHSEALHITSKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSRLSVSPRSPLSPSCISPELFSPESMGLKLKPIKTRIPGEM* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3564 349 PANTHER N-MYC DOWNSTREAM REGULATED 7 346 IPR004142 -
Tpr1g3564 349 Gene3D alpha/beta hydrolase 17 302 IPR029058 -
Tpr1g3564 349 Pfam Ndr family 23 307 IPR004142 -
Tpr1g3564 349 SUPERFAMILY alpha/beta-Hydrolases 24 300 IPR029058 -
Tpr1g3564 349 PANTHER PROTEIN NDL2 7 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3564 Tpr-Chr1 39780736 39785681 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3564 - - gmx:100815084 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3564 1 39780736 39785681 Tpr1g3564 1 39780736 39785681 ECH