Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3561 ATGATATTTGCTTTTGACACCCCCAAAAAAATGTCTTCACAATTATCCCACCATAATATTCAAGGTCTAACACAAGAAGAATTCAAAGAACTTGAACCAATCATAAAAAAATACCACATATTAGAACCAACACCAAACACATGTACATCAATTATAACCTACAAAATTGAAGCACCATCAAACATAGTGTGGCCATTTGTTAGAAGCTTTGAGAATCCACAAAAATACAAACATTTTGTCAAAGGTTGTAACATGAAAGGCGACGGTAATGTTGGAAGTATAAGAGAAGTGACGGTTGTTTCAGGTTTACCAGCTTCAACGAGCACAGAAAGATTAGAGATTTTAGATGATGAAAAACATGTACTAAGTTTTAGAGTTGTTGGTGGCGAACATCGTCTTCAAAACTATCGATCGGTTACTTCGGTTAATGAATTTGTCAACGATGAAGGTAAGGTTTATACTATTGTTTTGGAATCTTATATTGTTGATATTCCACATGGGAACACTGAAGAAGATACCAAGATGTTTGTTGACACTGTTGTCAAGCTTAATCTTCAAAAACTTGGAGTTGTTGCTATGAGTTCATGTTCATCCATGCATGGACAATAA 609 0.3465 MIFAFDTPKKMSSQLSHHNIQGLTQEEFKELEPIIKKYHILEPTPNTCTSIITYKIEAPSNIVWPFVRSFENPQKYKHFVKGCNMKGDGNVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLQNYRSVTSVNEFVNDEGKVYTIVLESYIVDIPHGNTEEDTKMFVDTVVKLNLQKLGVVAMSSCSSMHGQ* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3561 202 Pfam Polyketide cyclase / dehydrase and lipid transport 55 188 IPR019587 -
Tpr1g3561 202 Gene3D - 12 201 IPR023393 -
Tpr1g3561 202 CDD PYR_PYL_RCAR_like 55 188 - -
Tpr1g3561 202 SUPERFAMILY Bet v1-like 48 188 - -
Tpr1g3561 202 PANTHER - 25 196 - -
Tpr1g3561 202 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 25 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3561 Tpr-Chr1 39752491 39753294 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3561 K14496 - gmx:100778183 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3561 1 39752491 39753294 Tpr1g3561 1 39752491 39753294 ECH