Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3556 ATGATGGAGTTAAATGCAAGTTATGACATTGAGGAATCATGTTCTACGCAAAAAATGTTGGAGCATGAGTTGTGGCCCCTAGATCCAATTGATCCAAAGAATGCAAAGTTTCCATGTTGTTTGGTTTGGAATCCACTTCCAGTTGTCTCATGGTTGGCACCCTTCATTGGTCATGTTGGCATATGCAGGGAGGATGGAACTGTTTTAGATTTTTCAGGATCATATTGTGTGAATGTCGATGATTTTGCTTTTGGTCCAGTGGCAAGATACTTGGAACTCGACCGTAGACAGTGTTGCTTTCCTCCTAACCTATCTGCACATACATGCAAACACGGCTACCGGCATACTGAGTATGGGACCGCAATAACATGGGACGACGCCTTAAGGACAAGTTTGCGGCATTTCGAGAGTAAAACATACAACCTTTTCACATGCAACTGTCACTCATTTGTTGCTAATTGTCTGAATAGGTTCTGTTATGGTGGATCAATGAGTTGGAACATGGTAAATGTAGGCATCTTGATACTATTCAAGGGACATTGGGTTGATTTCTGGTCTATTGTAAGGTCTTTTCTGCCTTTTGTTGTGGTTGTTTGCATAGGTATTTTCATGGTTGGATGGCCCTTCTTACTTGGGTTACTATCCTTCTCTCTACTCTTAATTGGATGGTATCTATTGGGTACTTACCTATTCAAAAGCCTATTAGAGTGCTAG 714 0.4132 MMELNASYDIEESCSTQKMLEHELWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGICREDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSAHTCKHGYRHTEYGTAITWDDALRTSLRHFESKTYNLFTCNCHSFVANCLNRFCYGGSMSWNMVNVGILILFKGHWVDFWSIVRSFLPFVVVVCIGIFMVGWPFLLGLLSFSLLLIGWYLLGTYLFKSLLEC* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3556 237 PANTHER UNCHARACTERIZED 2 237 IPR008496 -
Tpr1g3556 237 PANTHER PROTEIN REVERSION-TO-ETHYLENE SENSITIVITY1 2 237 - -
Tpr1g3556 237 Pfam Protein of unknown function (DUF778) 46 95 IPR008496 -
Tpr1g3556 237 Pfam Protein of unknown function (DUF778) 97 181 IPR008496 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3556 Tpr-Chr1 39715118 39718116 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3556 K20726 - gmx:100817575 433.335