Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3553 ATGGCTATAATACACATACGCATGTCACCGTTCCCTTCATCAACAAAAACCATATTTTTCATCTCAACAAACAAATCAATCACCACCACCAACACCACCATCAACAACAAAACCAAATTATTGCCATTATTATGTTTAAGTTCAAGAAACGGAACAGAGTGTCCTGTTCCATTAGAACAACAACCCATAAATGAGTATCAATCATTGTCAACATCGTTTCCATTTTCATGGGCAGCCGGCGATGTGGTTGAATTTGGCTCCCGTCTCTTTGTTGTGGGATTTTCTTTTGCTCTGTTTGTTGGGTTACCTGTAGCTTGGTTTGGTGCTGTTGGAGCTCAATCTGAACCTGCTAAGAAGATTGTTGGTGCAGCTTCTAGTGGTGTTTTGGCGGTTACATTTGCGGTTGTTAGGATGTATCTTGGTTGGGCTTATGTCGGTAATCGCTTACTCAGTGCCACTGTTGAATATGAGGAGACAGGGTGGTATGATGGTCAGATATGGGTGAAGACTCCTGAAGTATTGGCGCGTGATAGACTCTTGGGATCATTTTCTGTTAAGCCTGTACTCAATAGATTGAAAATCACTCTAATCGGTCTGGCGGCGTGCTTGGGGGCATGTGCTCTAACCTTCAGTAACATTGATGAAAGCTATCTAACATCGAGAGAAACAGGAGTTCGAGCAATACCTGGAGCTTACAATGATGAATCTGCAAGATCATTTGAACCAGATGCATTTTGTGGTGAGCCTGATCTTCAAGAGTAG 762 0.4252 MAIIHIRMSPFPSSTKTIFFISTNKSITTTNTTINNKTKLLPLLCLSSRNGTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEFGSRLFVVGFSFALFVGLPVAWFGAVGAQSEPAKKIVGAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTPEVLARDRLLGSFSVKPVLNRLKITLIGLAACLGACALTFSNIDESYLTSRETGVRAIPGAYNDESARSFEPDAFCGEPDLQE* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3553 253 Pfam Conserved in the green lineage and diatoms 27 54 197 IPR009631 -
Tpr1g3553 253 PANTHER OS05G0539900 PROTEIN 44 251 - -
Tpr1g3553 253 PANTHER - 44 251 IPR009631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3553 Tpr-Chr1 39706386 39709258 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3553 - - lja:Lj5g3v0391640.2 315.849