Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3551 ATGAGGGAAGAAAATAATAATAACAACAACAACCCATCAGAAAACAAGTCCAAAGTTTCAAAATTTTCCGATCAAAATCAACCACCAAAGCTTCAAACCACAAAAGGAACAAACCCCAATAACAATCATTCAAAGCCAAGGTTATGGGGTGCTCACATTGTAAAAGGGTTTTCAGCTGACAAAAAAACCAAACAACAATCAACTGTTCCGACAAAAAAACAGACAACAATAACAACAACAATCTCGGATGTTGCTAATCAGAAAAACCCTTTTGTTCCAGCTCAATCAAGAGCGAAAAGATCTCTAATGGGTGATTTGTCATGTTCTCAAGTTCATCCACATGCTTTTCCAACACATAGGAGACAATCATCAACTGATTTATTCACCGAGTTAGATCATATGAGAAGCTTGTTGCAAGAGTCTAAGGAGAGAGAGTCTAAGCTGAATGCTGAGTTGGCTAAGTGTAGGAAGAATCAGAGTGAGGTTGATGAGCTTGTGAAGAAAGTTGCTTTGTTAGAAGAAGAGAAAAGTAGTCTCTCTCAGCAATTGGCTGTATTGGAGAGACAGGAAGAAGTTGTGAAAGGGGAAAATAAGCATAGTTCTATGCAGAATCTTGAGCTTGAAGTTGTTGAGTTGAGAAGGTTGAATAAGGAGTTGCATATGCAGAAGAGGAACCTCACTTGCAGGCTCTCTTCTATGGAGTCTCAATTATCGTGTTCTCCCAATTCTTCAGAGAGTGACATTGTTGCGAAATTTAAAGCCGAGGCGTCATTGCTCCGGCTCACGAACGAAGACCTGAGCAAACAAGTAGAAGGCTTACAAACAAGCAGATTAAATGAAGTGGAGGAACTAGCCTACTTGAGGTGGGTGAATTCATGTTTACGAACCGAGTTGAAGAATACATGCTCAACATTGGATTCTGATAAGCCATCTAGTCCTCAATCTGTTGTGAGTAGTAGCGGAGATTCTATTAGTTCTTTCTCTGACCAAAGCGGTAGCGCAAATAGCTTCAATTTAGTTAAGAAGGCAAAAAAGTGGGCAATAACTAGTGAGTCACAAGTAGAGTGCACAAATAGTAGTCTTATTGAGAAAAATTGGATTGAATCAATTTCTGGGAGAAACAACAGAAGACATTCAATTAGTGGTTCCAATAGCTCAGAGGAAGAGGTTATTGTATTGAATAAAAGAAGACAATCTAATTGTTTTGATTCTTTTGAATGTTTAAAAGAAATGGAAAAGGAATCAATGCCAATGCCATTATCTATTCAACAATCTGTTTTGGAAAAGAGGGCATTAAGGATTCCTAATCCTCCTCCAAGACCTTCTTCATGTTCTATTTCTAGCAAAACAAAACAAGAAAGCTCGGTTCAAGTTCAAGTTCAACCTCCTCCACCTCCGCCTCCACCACCACCTCCTATGAGTTTTGCATCAAAAAGTAATACAGCAATGGTAAAACGAGCGCCACAAGTGGTCGAATTGTACCACTCACTCATGAAGAGAGATTGTAGAAGAGATTCTTCAAATGGAGGACTCTCTGATGCTCCTGATGTTGCAGATGTTCGTAGTAGCATGATTGGAGAAATCGAGAACCGTTCGTCACATTTACTTGCTATAAAGGCAGATATTGAAACACAGGGAGAATTTGTAAATTCATTGATTAGAGAGGTGAACAATGCGGCATATGAGAACATAGACGACGTAGTTGCATTTGTGAAGTGGCTTGATGATGAACTTGGCTTCCTTGTGGATGAAAGAGCTGTTCTTAAACATTTTGATTGGCCAGAGAAAAAAGCCGACACATTAAGAGAAGCATCATTTGGATATCAAGATTTGAAAAAGTTGGAATCTGAAGTTTCCTCCTACAAGGACGACCCTCGGCTACCTTGTGATATTGCTCTAAAGAAAATGGTTGCATTATCAGAAAAGATGGAACGTACAGTTTATACACTTCTCCGCACGAGGGATTCACTAATGCGAAATTGCAAGGAGTTTCAAATTCCTGTAGAATGGATGCTTGATAATGGAATCATTGGCAAGATAAAACTAGGGTCAGTTAAATTGGCCAAAAAGTATATGAAAAGGGTAGCCATGGAAGTTCAAACAAAGTCAGCATTTGATAAAGATCCTGCAATGGATTACATGGTTCTCCAAGGAGTGAGATTTGCTTTCAGAATCCATCAGTTTGCAGGAGGATTTGATGCAGAAACAATGCATGCATTTGAAGAACTTCGCAATCTTGCTTCTCTACTTAACAAAACATAA 2262 0.3899 MREENNNNNNNPSENKSKVSKFSDQNQPPKLQTTKGTNPNNNHSKPRLWGAHIVKGFSADKKTKQQSTVPTKKQTTITTTISDVANQKNPFVPAQSRAKRSLMGDLSCSQVHPHAFPTHRRQSSTDLFTELDHMRSLLQESKERESKLNAELAKCRKNQSEVDELVKKVALLEEEKSSLSQQLAVLERQEEVVKGENKHSSMQNLELEVVELRRLNKELHMQKRNLTCRLSSMESQLSCSPNSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRTELKNTCSTLDSDKPSSPQSVVSSSGDSISSFSDQSGSANSFNLVKKAKKWAITSESQVECTNSSLIEKNWIESISGRNNRRHSISGSNSSEEEVIVLNKRRQSNCFDSFECLKEMEKESMPMPLSIQQSVLEKRALRIPNPPPRPSSCSISSKTKQESSVQVQVQPPPPPPPPPPPMSFASKSNTAMVKRAPQVVELYHSLMKRDCRRDSSNGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIREVNNAAYENIDDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREASFGYQDLKKLESEVSSYKDDPRLPCDIALKKMVALSEKMERTVYTLLRTRDSLMRNCKEFQIPVEWMLDNGIIGKIKLGSVKLAKKYMKRVAMEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDAETMHAFEELRNLASLLNKT* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3551 753 Coils Coil 131 189 - -
Tpr1g3551 753 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 9 753 IPR040265 -
Tpr1g3551 753 Coils Coil 202 236 - -
Tpr1g3551 753 SUPERFAMILY Formin homology 2 domain (FH2 domain) 462 618 - -
Tpr1g3551 753 MobiDBLite consensus disorder prediction 1 47 - -
Tpr1g3551 753 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 9 753 - -
Tpr1g3551 753 MobiDBLite consensus disorder prediction 443 458 - -
Tpr1g3551 753 MobiDBLite consensus disorder prediction 435 468 - -
Tpr1g3551 753 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3551 Tpr-Chr1 39689040 39693487 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3551 - - mtr:MTR_1g016290 1158.28