Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3545 ATGGTTACAATCGCAGAAAGAATGGCCACCGTGAAACATAAGATATTGGTCATGTCCGGAAAGGGAGGTGTTGGCAAGAGCACATTTTCTGCCCAGCTGGCATTTGCTTTAGCTGCAAGGAATTTTAAAGTTGGTCTTCTTGACATAGACATTTGTGGTCCAAGCATTCCAAAGATGCTTGGTCTAGAAGGTCAGACGTTTCACCAGGGCAAGTTTGGGTGGTCACCTCTCTATGTGGGGTCTAATCTGGCAGTTATGTCATTTGGGTTTGTAATTTCTTCAGATACACCTGCTATATGGAAAGGTCCTCGCAAAAATGGACTTATCAGACAGTTTATAAAAGACGTTTATTGGGGTGAACTTGATTTTCTGATTGTTGATAATCCACCTGGAACCTCAGATGAACAAATTGAAATTGTTCAAGGCCTTGGTGCTGCTAACATAGATGGTGCAATCATAGTTACCACTCCTCAACAAGTCTCTCTTATTGATGTGAAAAAAGAAGTTAATTTTTGCAAGAAAGTTGGAGTGAAAGTTCTTGGGGTTGTAGAGAATATGAGTGGTCTATCTCAGCCCATCTCAAATTTAAAGTTTATCAAGATTACAGATAATGGTGAGAGGAAAGATGTTACAGAATGGACATTGGAATACATGAGAGAAAAGGCGCCTGAAATACTGAATTTCATTGCCAACAGTGAAGTATTTGATAGTAGTGGTGGTGGAGCGATAAAGATGTGCAACGAGATGAAGGTACCCTTTCTTGGTAAGGTTCCTTTAGATCCACAGCTTTGCAAGGCAGCTGAAGAAGGTAGATCATGTTTTAAAGATAAACACTGCGTTGTCAGTGCTCCAGCATTACAAAAGATAATAGACAAGCTGATGGAAACTATCGGGTTGTCAACGACCGTAAGTAGTGTAGTGTAG 924 0.4058 MVTIAERMATVKHKILVMSGKGGVGKSTFSAQLAFALAARNFKVGLLDIDICGPSIPKMLGLEGQTFHQGKFGWSPLYVGSNLAVMSFGFVISSDTPAIWKGPRKNGLIRQFIKDVYWGELDFLIVDNPPGTSDEQIEIVQGLGAANIDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENMSGLSQPISNLKFIKITDNGERKDVTEWTLEYMREKAPEILNFIANSEVFDSSGGGAIKMCNEMKVPFLGKVPLDPQLCKAAEEGRSCFKDKHCVVSAPALQKIIDKLMETIGLSTTVSSVV* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3545 307 Pfam NUBPL iron-transfer P-loop NTPase 11 196 IPR033756 -
Tpr1g3545 307 Pfam NUBPL iron-transfer P-loop NTPase 232 293 IPR033756 -
Tpr1g3545 307 CDD Mrp_NBP35 13 265 - -
Tpr1g3545 307 PANTHER CYTOSOLIC FE-S CLUSTER ASSEMBLY FACTOR NBP35 1 299 - -
Tpr1g3545 307 Gene3D - 7 302 IPR027417 -
Tpr1g3545 307 PANTHER NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED 1 299 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
Tpr1g3545 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 193 IPR027417 -
Tpr1g3545 307 ProSitePatterns Mrp family signature. 118 134 IPR000808 GO:0005524
Tpr1g3545 307 Hamap Iron-sulfur cluster carrier protein. 6 294 IPR019591 GO:0005524|GO:0016226|GO:0051536|GO:0140663
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3545 Tpr-Chr1 39624188 39625841 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3545 - - ahf:112770715 482.641