Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3539 ATGCGAGATAAATTGTGCATTTTGAGTGATTTAGAGGCTATGGCTGATTCTGTTAGACAAAGGAGAATGAGCGTAACAAACTCCGACGGAGAAAATCTGGTCGGCATATTACACGATGCGTCTTCCACTTCACTTGTTATCGTCTGCCATGGTTTTCAATCTTCCAAGGAAAGGATCCCCATGGTAAACCTTGCTGCTGCTCTGGAAAAAGATGGGATCAATGCCTTCCGATTTGACTTTGCCGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACTACAGAGAAGTTGAAGACCTACGAGCTATAGTCCAACACTTCCGTGAGAAGAAATATGTAATTATTGCAATTGTTGGTCATAGTAAAGGGGGTAACGTGGTTTTGTTATATGCTTCAAAATATAAGGATATTGATACTGTTGTCAATATCTCTGGCCGGTTTAACCTAGCAAGAGGTATGGAGAGTCGCCTGGGTGAAAATTTTATACAAAAGATCAAACAAGATGGATTTATAGATGTTAAAAACAAAAAAGGGAAGATTATGTTCCGTGTTACTGAAGAAAGTTTAATGGACCGTCTAAATACTATAACCCATCTTGCCTGCTTATCCATCCCTGAAAATTGCAGGGTGTTGACAGTTCACGGATCCATGGATGAAACTGTACCTGCAGAAGATGCTTTAGAGTTTTCTAAGTTCATCTTAAATCATGAATTGTGCATCATAGAAGGGGCTGATCATGAATACACTTATCATCAAGATGAATTGACCAGCTTAGTTTTGGAATTTATCAAGGTTCATAATGATAAGGAAAACAATACATCTAAGCAGACACGATTTGGAAGAGTAGATAAACCTATCCATTCACGATTCTAG 879 0.3868 MRDKLCILSDLEAMADSVRQRRMSVTNSDGENLVGILHDASSTSLVIVCHGFQSSKERIPMVNLAAALEKDGINAFRFDFAGNGESEGSFQYGNYYREVEDLRAIVQHFREKKYVIIAIVGHSKGGNVVLLYASKYKDIDTVVNISGRFNLARGMESRLGENFIQKIKQDGFIDVKNKKGKIMFRVTEESLMDRLNTITHLACLSIPENCRVLTVHGSMDETVPAEDALEFSKFILNHELCIIEGADHEYTYHQDELTSLVLEFIKVHNDKENNTSKQTRFGRVDKPIHSRF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3539 292 Pfam Serine aminopeptidase, S33 43 164 IPR022742 -
Tpr1g3539 292 SUPERFAMILY alpha/beta-Hydrolases 16 266 IPR029058 -
Tpr1g3539 292 PANTHER RE40534P-RELATED 16 274 - -
Tpr1g3539 292 Gene3D alpha/beta hydrolase 14 288 IPR029058 -
Tpr1g3539 292 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 16 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3539 Tpr-Chr1 39583144 39588345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3539 44 157 Acyl Lipid Metabolism Gene Families AT2G39410 31.667 1.38e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3539 K06889 - gmx:100776424 466.848