Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3531 ATGCAAGACCTACGCCGTTACTCAAACGACATAATCCAACTCGACCTAGCCACCACCACCAACACCGCAACAACCACCACAACAACAACCATGTCAATGAATTCAAACTCCTCTTCCTCCTTATCAATCGACATCGACGAATCAGCCGAAACTAAAATCCACCGTCTCATAACAGAACATCCAGTCATCATCTTCACACGATCTTCTTGCTGCATGTGTCACGTCATGAAGAAGCTTCTCTCAACAATCGGCGTTAATCCAACGGTCATCGAATTAGATGATAACGAGATCGCTTCTCTTTCTCATGATGATGATGATGATCTTGCCTCCGTTCTTCGTAACCGTTCTCCTGCCGTCTTCATCGGTGGTGCTTGCATCGGCGGACTAGAGTCTCTTGTTGCTCTCCACGTCAGCGGTCATCTTGTTCCTAAACTCGTTCAAGTCGGTGCTCTTTATGTACGATAA 465 0.4645 MQDLRRYSNDIIQLDLATTTNTATTTTTTTMSMNSNSSSSLSIDIDESAETKIHRLITEHPVIIFTRSSCCMCHVMKKLLSTIGVNPTVIELDDNEIASLSHDDDDDLASVLRNRSPAVFIGGACIGGLESLVALHVSGHLVPKLVQVGALYVR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3531 154 SUPERFAMILY Thioredoxin-like 51 151 IPR036249 -
Tpr1g3531 154 ProSiteProfiles Glutaredoxin domain profile. 50 152 - -
Tpr1g3531 154 PANTHER GLUTAREDOXIN 23 152 IPR011905 -
Tpr1g3531 154 CDD GRX_GRXh_1_2_like 61 144 - -
Tpr1g3531 154 TIGRFAM GlrX-like_plant: glutaredoxin-like family 53 152 IPR011905 -
Tpr1g3531 154 Pfam Glutaredoxin 62 126 IPR002109 -
Tpr1g3531 154 PRINTS Glutaredoxin signature 62 80 IPR014025 -
Tpr1g3531 154 PRINTS Glutaredoxin signature 109 122 IPR014025 -
Tpr1g3531 154 PRINTS Glutaredoxin signature 123 136 IPR014025 -
Tpr1g3531 154 PANTHER GLUTAREDOXIN-C6 23 152 - -
Tpr1g3531 154 Gene3D Glutaredoxin 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3531 Tpr-Chr1 39541720 39542465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3531 53 153 Miscellaneous Gene Families AT4G15690 39.216 3.53e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3531 - - lja:Lj5g3v0407150.1 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3531 1 39541720 39542465 Tpr7g0795 7 7011951 7012898 PCT