Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3529 ATGGAGGAAGGATACACCAGAAGCAGTAAGTTCAAGAGGGTATGTGTCTTCTGCGGCAGCAACTCCGGCAACCGTCAAGTTTTCAGTGACGCCGCCATTCAATTGGCTGATGAACTGGTTAAGAGGAACATAGATTTGGTGTATGGTGGAGGAAGTGTTGGACTGATGGGTTTAATATCTCAGAAAATGTATAATGGCGGCTGCCATGTTCTCGGGGTTATTCCAAAAGCTCTCATGCCTCATGAGATATCTGGTGAAGCAGTAGGTGAAGTAAAGATTGTTTCAGATATGCATGAGAGAAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTATTGCACTCCCTGGAGGATATGGAACTATGGAAGAGCTTCTGGAGATGATAACTTGGGCTCAACTTGGAATTCATAAAAAACCGGTTGGCCTACTGAATGTTGATGGTTACTATAACTCTTTGCTTGCATTATTTGATAATGGTGTTGAAGAAGGCTTCATTAAGCCCAGTGCTCGGAATATAGTTGTTTCAGCTTCATCAGCCAAAGAACTTATGATGGAGATGGAGAGTTACTCTCCTTCCCATGAGCATGTAGCCCCTCATGAGAGCTGGCAGATGAAGCAATTAGGTAATTATCCAGGACAAGAAAAGACAGAATGA 654 0.4327 MEEGYTRSSKFKRVCVFCGSNSGNRQVFSDAAIQLADELVKRNIDLVYGGGSVGLMGLISQKMYNGGCHVLGVIPKALMPHEISGEAVGEVKIVSDMHERKAAMAQEADAFIALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNSLLALFDNGVEEGFIKPSARNIVVSASSAKELMMEMESYSPSHEHVAPHESWQMKQLGNYPGQEKTE* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3529 217 MobiDBLite consensus disorder prediction 194 217 - -
Tpr1g3529 217 PANTHER LOG FAMILY PROTEIN YJL055W 9 207 - -
Tpr1g3529 217 Pfam Possible lysine decarboxylase 56 186 IPR031100 -
Tpr1g3529 217 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 9 207 - -
Tpr1g3529 217 TIGRFAM TIGR00730: TIGR00730 family protein 12 189 IPR005269 GO:0009691|GO:0016787
Tpr1g3529 217 SUPERFAMILY MCP/YpsA-like 10 189 - -
Tpr1g3529 217 Gene3D - 10 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3529 Tpr-Chr1 39521263 39523880 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3529 K22522 - gmx:100785484 387.882