Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3525 ATGAAGAACGATTGGTTATCATGGATGGATTCAGATCCAAACATGTATCCATTACAACCATTCGTATTCAATAATTTCTTAGGTTCTCAATTTCTACAATCGTTTCTTGAAAATTCTAGATGTTTCTACGAAAGTTCGGCTATAGAAGAAGCATTCGGCCACGTGTCGAAATTCGCCGGCGCGTTGTTGTTTTTGTTTTCCGGTGGTGGATCGAATGTCTGCGGTGGTGGTTCTTTTCGATTTGGCGGTGGTTCTGGTAATGTGAATATGAATATGAAGGTTAAGCCTGTGATTACGAATAATGTGGCTGGGTTTGGGTTTCCGTTTGGTTCTAGGTCGAAGAGGAAAGGTTTGGAACGTGTGAGTTTGGGGAAGATTTCGAATTTTGTGGTTAAGTTCTTTTGGAGTGAAGCTAAAAAAATTCAATCGTATCCTATTCTTTCGATTGCTGCTGCATTGGTGTTGCCAATTCAAAATTTGTCATCAAATCTACTGTCTGGGCCAATGCAGGATCCTGATCTGCAAATGAATGAAAGCATCGACCGGATGCCAAAGGATTTTGAACGTCCAGGATGTCCTCGCCTATCCATTTCCGAGTTGAACCTAGCAAACTCTGCTGTGGAGCCTAAAACTGGCATTGAATTTCCTGTGGTTCTGGATAATTTATCAGATGGGGGGCAGAATTCTAGCTTTAACTCAGAGGTCCTTGTTGGAACAGGATACAAAAACATGACAATTGTTAAAATCAAGACGCTGAAAGTATATGCTTTTGGATTTTATGTTCACCCGTACTCCCTCTGTGAGAAGTTGGGCCCAAAATATGCATCAATTTCTGCAGATGAACTGGATAACCATAATGATTTCTACCAGGATCTTCTCAGGGAAGATATCAATATGACTGTTAGGCTTGTCGTAAATTACAAAGGAATGAAAATTAACAATGTGAAAGATGCTTTTGAAAAATCACTTAGAGCTCGATTAGTTAAGACAAATCCATCCACAGACTTTAATTGCCTTTGGACATTTGGTTCGTACTTTACGGAGAATATCTCGATACCTTTGGGAACCGTTATTGAGTTTAAGCGAACAGTTGATGGGCGTCTGATTACTGAAATTGGTGGCAATCACATTGGAAGTGTCCACAGCAAAGATTTGTGTCGGGCTTTCTTTGGCATGTACATTGGAGATCTCCCTGTTTGCGAACAAACTAAGAAAGAGATTGGCATGAACATCGCAAATATTATTAGGAATTGTTGA 1257 0.401 MKNDWLSWMDSDPNMYPLQPFVFNNFLGSQFLQSFLENSRCFYESSAIEEAFGHVSKFAGALLFLFSGGGSNVCGGGSFRFGGGSGNVNMNMKVKPVITNNVAGFGFPFGSRSKRKGLERVSLGKISNFVVKFFWSEAKKIQSYPILSIAAALVLPIQNLSSNLLSGPMQDPDLQMNESIDRMPKDFERPGCPRLSISELNLANSAVEPKTGIEFPVVLDNLSDGGQNSSFNSEVLVGTGYKNMTIVKIKTLKVYAFGFYVHPYSLCEKLGPKYASISADELDNHNDFYQDLLREDINMTVRLVVNYKGMKINNVKDAFEKSLRARLVKTNPSTDFNCLWTFGSYFTENISIPLGTVIEFKRTVDGRLITEIGGNHIGSVHSKDLCRAFFGMYIGDLPVCEQTKKEIGMNIANIIRNC* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3525 418 Gene3D - 265 407 IPR016089 -
Tpr1g3525 418 PANTHER FATTY-ACID-BINDING PROTEIN 2 12 418 - -
Tpr1g3525 418 PANTHER FATTY-ACID-BINDING PROTEIN 2 12 418 - -
Tpr1g3525 418 SUPERFAMILY Chalcone isomerase 207 416 IPR036298 GO:0016872
Tpr1g3525 418 Pfam Chalcone isomerase like 235 407 IPR016087 GO:0016872
Tpr1g3525 418 Gene3D - 207 393 IPR016088 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3525 Tpr-Chr1 39473741 39479182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3525 - - gmx:100803025 525.013