Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3515 ATGGCTTCAGCTTCTGTTTCAATGTCTTTACCACTAACTCAAGCCACACACAAAAACCTCAAAAATCCTTCTTCCAACACACCCTTTTTGAAACCATTACCCTTTCCACAAGCAAAGAAGACACTAATCAACAATTCATCATCAAAATCCAATCTTGTTGGAATTCAAGCATCATTGAAAGACAAAACAGTTAAGGGTCTAACAGCTTTTGCATTAACTGCTTCTATGGTTTTACCAGAAGCTGCTCATGCAGCTGGAAATGACTTTTCACCTTCTCTTAAAAACTTTTTGCTTAGTATTGCTGCTGGTGGTGTTGTTCTTACAGCTATCTTAGGTGCTGTTATTGGTGTTTCCAACTTTGATCCTGTTAAGAGAACTTAA 381 0.3753 MASASVSMSLPLTQATHKNLKNPSSNTPFLKPLPFPQAKKTLINNSSSKSNLVGIQASLKDKTVKGLTAFALTASMVLPEAAHAAGNDFSPSLKNFLLSIAAGGVVLTAILGAVIGVSNFDPVKRT* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3515 126 PANTHER OS07G0673550 PROTEIN 2 126 - -
Tpr1g3515 126 Pfam Photosystem II reaction centre X protein (PsbX) 90 125 IPR009518 GO:0009523|GO:0015979|GO:0016020
Tpr1g3515 126 PANTHER OS07G0673550 PROTEIN 2 126 - -
Tpr1g3515 126 Gene3D Single helix bin 89 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3515 Tpr-Chr1 39324746 39325333 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3515 - - mtr:MTR_1g015290 222.631