Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3513 ATGTCAAAAATGTACAAGATGGAGAAAACATCTTCAAAACATGACAGATTCTTAAACCCTTCATTCTCTTCCACACTCTTAGACCAAATTTACCGTTCCATCGACGACGATGGCAAAGAACGAAAATCAACCACGGAAACAGCCAAATTCTTCAGAGAACAAAAACCAACGGTTATCAACAAACTACCAACCGACAGAAAACATAACAACAACAACAACTACAAACCAAAAACTGAAAAAACCGTTTCTGTCGTGAAAACTGACAACAACAGAAGATTAAATCAAAATGATCACGACCAAGATGCTCTGTTCTTCAGTTCAACTTCAATTTCCTCTGATTCTAGCTCCGGTGGATTCTCATCCTCTGACACAGATTCATTATACGGAACAAAGTCACGTGCTTCGTCGTGCTTTATTCCACCGAGGCCAAAGCCGGTGAAAACAAGTGCTTCATTCAGATATGAAAATGAGAAGGAGAAACAGGGTAATCGCGTTTTGAACGGGTTTTTTCGAAGTTCAGAAACCAAACAAGGCACAGAAAATCGCCGGGAGGAAGTGATTTTAATAAAGAACAAATCTAGAGCGGTTAAGATTTACAACAACTTGAAGAAAGTGAAGCAACCAATTTCGCCAGGTGGAAAACTTTCGAGTTTTCTTAATTCTCTTTTTAATAACAATGAGAAGAAAACAAAGACCGAGGAACAGAAGAAGCAGAGAAACACATGGGAGACTCAGGATAGAAAAGTAACTTCCATGTGTTCATCTGCTTCTTCGTTTTCTCGGTCTTGTTTGAGCAAGACCGCGTCGTTTTCTCACAGAGATAGTGATAAAATGGCGCGAGTTTGTGGTGTGGAAGATCGTAGGGTTAAGGTGGAGGAGGCTACTAGAAAGTTTTTGAATGAATATCGTTGTTATAACTACAAGAAGAAGAATGATTTGGTTTTGTTAAAGGATTTGTGTGTTAATCTGAATGAGGAAGAAGAAGATGATGATGATTTGGCAAGTTGTGCTAGTTCTGATCTATTTGAGTTGGATCATTTGGGTGTGTTGGGAGATGATAGGTATTGTGAGGAACTTCCTGTGTTTGGGACTACTCGTGTTAATTAA 1107 0.3902 MSKMYKMEKTSSKHDRFLNPSFSSTLLDQIYRSIDDDGKERKSTTETAKFFREQKPTVINKLPTDRKHNNNNNYKPKTEKTVSVVKTDNNRRLNQNDHDQDALFFSSTSISSDSSSGGFSSSDTDSLYGTKSRASSCFIPPRPKPVKTSASFRYENEKEKQGNRVLNGFFRSSETKQGTENRREEVILIKNKSRAVKIYNNLKKVKQPISPGGKLSSFLNSLFNNNEKKTKTEEQKKQRNTWETQDRKVTSMCSSASSFSRSCLSKTASFSHRDSDKMARVCGVEDRRVKVEEATRKFLNEYRCYNYKKKNDLVLLKDLCVNLNEEEEDDDDLASCASSDLFELDHLGVLGDDRYCEELPVFGTTRVN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3513 368 MobiDBLite consensus disorder prediction 54 82 - -
Tpr1g3513 368 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 4 274 IPR039621 GO:0009734
Tpr1g3513 368 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 284 367 IPR039621 GO:0009734
Tpr1g3513 368 PANTHER PROTEIN BIG GRAIN 1-LIKE B 4 274 - -
Tpr1g3513 368 PANTHER PROTEIN BIG GRAIN 1-LIKE B 284 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3513 Tpr-Chr1 39311807 39313276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3513 - - mtr:MTR_1g015275 456.062