Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3502 ATGGCGACCTCCGTCGCTGTCGGCAGCACTCTAACGGCGTACGATCGCCGGATTATTAATGTAGTAAACGTCGGCGCGTCGAGTCTCTCTTTTGCTGGTTCCACCTTCATTGTACTTTGCTACCTTCTCTTCAAAGACCTCCGCAAGTTTTCCTTCAAGCTCGTTTTCTATCTCGCACTTTCAGATATGCTTTGCAGTTTCTTCAGCATAATAGGGGACCCATCCAGAAATTTCTTTTGTTATGCTCAAGGATATAGTACACATTTCTTTTGTGTGGCATCTTTCCTTTGGACGACAACAATTGCTTTTACCCTTCACCGGACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCAATGTATCATTTATACGTCTGGGGTACTTCCCTGGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAGACATTTTGGTACATGGTGTGGGACTCAGACAGGTCTTACAGGGAAGGCAGTTCATTTTGTTACATTTTACATGCCACTGTGGGGTGCAATTCTATATAATGGGTTTACATACTTGCAAGTAATACGCATGCTGAATAATGCAACCCGTATGGCAAGTGGCATGTCAGGCCAAGCTTATGTCTCAGATACAAGAGACAACATGAGGGCTCTAAATCGCTGGGGATACTATCCGCTAATTCTAATAGGATCATGGGCTTTTGGCACTATTAACCGAATTCATGATTTTTTTGAACCTAACCAAAAGATTTTTTGGCTCTCACTTCTTGACGTTGGAACGGCTGCCCTTATGGGCCTCTTTAACTCAATTGCATATGGCCTCAATTCTTCTGTTCGCCGGGCAATTTGTGAAAGACTAGACAAGTTCTGGCCCGAGCGACTGAACAGATGGCTCCCTAACAATTTCAAGTACAAGAGCTTATCGCAAGAAAGTGAACTCGCCGTGTTCAAAACTGAAGATCAATGA 957 0.4347 MATSVAVGSTLTAYDRRIINVVNVGASSLSFAGSTFIVLCYLLFKDLRKFSFKLVFYLALSDMLCSFFSIIGDPSRNFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMYHLYVWGTSLVMTVMRSFGNDHRHFGTWCGTQTGLTGKAVHFVTFYMPLWGAILYNGFTYLQVIRMLNNATRMASGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPNQKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNNFKYKSLSQESELAVFKTEDQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3502 318 Pfam Slime mold cyclic AMP receptor 21 273 - -
Tpr1g3502 318 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 10 302 - -
Tpr1g3502 318 PRINTS GCR1-cAMP receptor family signature 30 48 IPR022343 -
Tpr1g3502 318 PRINTS GCR1-cAMP receptor family signature 49 64 IPR022343 -
Tpr1g3502 318 PRINTS GCR1-cAMP receptor family signature 80 98 IPR022343 -
Tpr1g3502 318 PRINTS GCR1-cAMP receptor family signature 221 239 IPR022343 -
Tpr1g3502 318 PRINTS GCR1-cAMP receptor family signature 253 272 IPR022343 -
Tpr1g3502 318 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 19 273 IPR017981 GO:0004888|GO:0007166|GO:0016021
Tpr1g3502 318 Gene3D - 12 295 - -
Tpr1g3502 318 PANTHER TRANSMEMBRANE PROTEIN 116 10 302 - -
Tpr1g3502 318 SUPERFAMILY Family A G protein-coupled receptor-like 13 290 - -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 19 34 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 36 50 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 52 74 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 82 95 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 97 115 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 120 135 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 159 171 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 172 195 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 215 236 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 245 262 IPR022340 -
Tpr1g3502 318 PRINTS Putative plant GPCR, GCR1, signature 263 279 IPR022340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3502 K22987 - gmx:100794547 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3502 1 39227608 39234664 Tpr1g3502 1 39227608 39234664 ECH