Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3495 ATGGCGACCTCTTCCTTCTTAGCCTCAAATTTCAAATTCACACTCCCTTCGAAGAATCCTAGGTATCTCTTTGTGTTTCATGGATTCAGACACCAACACCCAAATGGTTGTTCATTCAACAAATGTTCCAAATTTCAATCTATGTCTACTAAGATAGTGTCAGCTACTACAAGAACAGCTTCTGATACGTATGTTGGAAGAGACAATAGCAAGATTTACAACTTGGACTCTTGTCTTGTGATTCCACCACCTACTTCAACCAAACCTAGAGCTATAATCAAATTCATTGGTGGTGCTTTCATTGGTGCTATTCCTCAACTTACTTATGGATATCTAATAGAGTTATTGGCAAAAGAAGGTTTTGTTGTTGTGGTGGTGCCTTATAATGTGACATTTGATCATTCTCTTGCTGCCAAACAAGTATATGAGAAGTTTCATACTTGTTTGGATACAATCCTTACTTCTGGATTGCCTCAAGCCAATTTGTCACCTGCACAGCTTGGAGACCTTCCTATTTTCTCTGTTGGCCATAGCAATGGTGCACTTCTTCAAGTACTCATAGGAAGCTTATTTTCTGAGAAATTACCCAAGGCTAATGCTGTAATCGCTTACAACAACAGACCAGCGACAGAGGCGGTCCCTTACTTTGAGCAGTTGGGACCTGCAGTCAGCCAGATGATGCCGGTCGTGGAAGCAAATCCTATTTACTCAATAGCTAGAAATGCACCAGGAGATGCATGGAAGATGGCGCTGGATACTTTTGGATCAATTCTGCAGGAAAGTGAGCGGGAAGTTCTGAACTCTATAACTAAATTTGTTGATCAGCTGCCTTTAGTAATGAGTGAGGTTACGCAGGGAGTCTCAGAGTTCAAGCCAACACCATCCGAAAATCGCGATTGCTTTAAAACTTCATACAATGTCAAACACACGTTATTGGTGAAATTCAATTCCGACACAATTGACGAAACAAATATTGTTGAAGAAACACTCAAGCCTCGCGTGGAATCCTTTGGTGGGACAGTAGAAAAAGTAGAATTGAGTGGTAACCACATCACACCATGCATCCAGGAACCAAGATGGCAAGTGGGAAAGTTGTATACTCCAGCAGATGCTGTTGCTCAAAGACTTAAATCTCTTTCTTTGAGTGATATTAGAATCCTTGCCACAACCATTAGTGATTGGTTCAAACGTTTTGAGGATTGA 1203 0.4098 MATSSFLASNFKFTLPSKNPRYLFVFHGFRHQHPNGCSFNKCSKFQSMSTKIVSATTRTASDTYVGRDNSKIYNLDSCLVIPPPTSTKPRAIIKFIGGAFIGAIPQLTYGYLIELLAKEGFVVVVVPYNVTFDHSLAAKQVYEKFHTCLDTILTSGLPQANLSPAQLGDLPIFSVGHSNGALLQVLIGSLFSEKLPKANAVIAYNNRPATEAVPYFEQLGPAVSQMMPVVEANPIYSIARNAPGDAWKMALDTFGSILQESEREVLNSITKFVDQLPLVMSEVTQGVSEFKPTPSENRDCFKTSYNVKHTLLVKFNSDTIDETNIVEETLKPRVESFGGTVEKVELSGNHITPCIQEPRWQVGKLYTPADAVAQRLKSLSLSDIRILATTISDWFKRFED* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3495 400 PANTHER INITIATION FACTOR 4F SUBUNIT (DUF1350) 41 398 - -
Tpr1g3495 400 Gene3D alpha/beta hydrolase 65 278 IPR029058 -
Tpr1g3495 400 PANTHER OS04G0405600 PROTEIN 41 398 IPR010765 -
Tpr1g3495 400 Pfam Protein of unknown function (DUF1350) 87 395 IPR010765 -
Tpr1g3495 400 SUPERFAMILY alpha/beta-Hydrolases 80 196 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3495 - - gmx:100799131 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3495 1 39142701 39147342 Tpr1g3495 1 39142701 39147342 ECH