Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3469 ATGGGGAATGAGTACCATGAAGCAACCGATGGACTTGTGAAACTATTCAGAAAAGCAGATCACGATCTTGATATTGTTCATCACCGTCTTCAAACCGAGTTTCAACAACTTTACCCAGACAACGCAAACCCTATGAAGCTTGTTTCTAGGATAAAAAAGGTACAAGAAGAAATTTCAATTTTGAAAGGACAGTGTCATGAGCTTCTTGCTGCTAAGCAGGATTTGATTGATAAAGCTCAGACAGTTCTTGTTGAGAATAGAAATTTAGTGCAGCGTATGCAATCATCTGTTGGCATCCCGTTTACTGGTGAAGATGATGATGCATTCACTAACTTCAATCAGGTGATTGATGAATGGACAGATCAAATAAGATCAAAAACAGGAAATGAAACCCACGATTCTGATTCTGGAGATCTCAACAAACTGCTCTTCTCAGCTATAGTTCAAAGTAATTGA 456 0.3838 MGNEYHEATDGLVKLFRKADHDLDIVHHRLQTEFQQLYPDNANPMKLVSRIKKVQEEISILKGQCHELLAAKQDLIDKAQTVLVENRNLVQRMQSSVGIPFTGEDDDAFTNFNQVIDEWTDQIRSKTGNETHDSDSGDLNKLLFSAIVQSN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3469 151 PANTHER SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 2 7 151 IPR026762 GO:0000940|GO:0005876|GO:0007059|GO:0008017|GO:0051301
Tpr1g3469 151 Coils Coil 51 71 - -
Tpr1g3469 151 Pfam Spindle and kinetochore-associated protein 2 6 111 IPR042091 -
Tpr1g3469 151 Gene3D - 6 119 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3469 K26095 - gmx:100500198 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3469 1 38953374 38957567 Tpr1g3469 1 38953374 38957567 ECH