Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3468 ATGTTTAACCCAACCACGCGTGTTATCAATGAACCCAGTGCGGTTCTCGATTTAGGTTCACAAATTGGGCGTTTCACAATCGATACGTCGTCGTTTCTAAACTTGAGTTCCGAAGCTTGTTCTCCATCGTTTCTCTCTAATTCTCTCTACTTCAACAACGTTGCAGCGCGTTCTGCACCAAAACGCACCGTTTCGTTGAGTTTAAAGCTCGGTGGTGGTGGTGGTGGTTATAGGTTTCGGAATTTTCTTCATGATTTTAATAGAGCTATTAGGTTTCATTGTGATAGGATTCCGCTTGGGTTTGCTTCGTTAAGATTGGGTGACGGTAACGGTGACGGTAATAATGGTAATGGTAACGGTGAAGGTGTTGGTGGAAATGGGAATGGGAATGGTACTGTTGTGGAAGATGATGGATTGAAATTGAACGGTTCTGATTGTGTTAAACCTAAGAAAGTTTTGATTTTGATGAGTGATACTGGTGGTGGTCATCGAGCTTCTGCTGAAGCTATTAAAGCTGCTTTTTATGAAGAATATGGCGATAATTATCAGGTGTTTATTACTGATTTGTGGTCTGAGCACACGCCTTGGCCGTTCAATCAAATTCCCAAGAGCTATAGTTTTTTGGTTAAACATGGCCCATTATGGAAGATGGCCTACTATGGAACTGCCCCACGTCTAGTTCATCAGTCCAATTTCGCCGCAACTTCAACATTCATAGCTCGTGAGGTTGCTAAAGGGTTAATGAAGTATCAGCCGGATATAATAATCAGTGTGCATCCATTGATGCAACACGTTCCACTTCGCATTTTGAGGTCAAGGGGTCTTTTAGATAAGATTGTTTTTACCACAGTTGTTACAGATATGAGCACGTGCCATCCAACATGGTTTCACAAGCTTGTAACTAGATGTTATTGTCCCACAACAGATGTTGCAAAAAGGGCAATGAAAGCTGGACTAAAGCAAACACAAATAAAGATTTATGGCCTACCTGTTAGACCTTCCTTTATTAAGCCTGTTCGGCCGAAGGATGAACTGAGGAGAGAGTTGGGGATGGATGAGGATCTTCCTGCTGTATTATTGATCGGAGGGGGTGAAGGTATGGGTCCGATAGAGGCTACGGCTCGGGCACTTGGAGATTTATTAAACGATGAGGGGGTTCCCACGGGTCAGATCCTTGTGATCTGTGGACGCAATAAGAAGCTTGCTAACAAACTCAGTGCTATCAATTGGAAGATTCCTGTGAAGGTCAAGGGATTTGTTACCAAAATGGAGGAATGCATGGGAGCTTGTGATTGCGTTATAACAAAGGCTGGCCCAGGGACAATTGCAGAGGCCATGATTCGAGGCCTACCTATTATTTTAAATGATTACATTGCTGGGCAGGAAGCTGGCAATGTTCCCTATGTTGTTGAAAATGGATGTGGAAAGTATTCTAAATCTCCTAAGGCGATAGCAAAAATTGTTGCAGACTGGTTTGGTCCCAAAGCCGACGAACTAAAAACAATGTCGCAAAATGCATTAAAGCTAGCAAGACCGGACTCTGTGTTCAAGATTGTCCATGACATGCACGAGCTAGTAAAACAAAGAAGCTTATTATCAGAGTATTCTTGTACAGCGTAA 1620 0.4284 MFNPTTRVINEPSAVLDLGSQIGRFTIDTSSFLNLSSEACSPSFLSNSLYFNNVAARSAPKRTVSLSLKLGGGGGGYRFRNFLHDFNRAIRFHCDRIPLGFASLRLGDGNGDGNNGNGNGEGVGGNGNGNGTVVEDDGLKLNGSDCVKPKKVLILMSDTGGGHRASAEAIKAAFYEEYGDNYQVFITDLWSEHTPWPFNQIPKSYSFLVKHGPLWKMAYYGTAPRLVHQSNFAATSTFIAREVAKGLMKYQPDIIISVHPLMQHVPLRILRSRGLLDKIVFTTVVTDMSTCHPTWFHKLVTRCYCPTTDVAKRAMKAGLKQTQIKIYGLPVRPSFIKPVRPKDELRRELGMDEDLPAVLLIGGGEGMGPIEATARALGDLLNDEGVPTGQILVICGRNKKLANKLSAINWKIPVKVKGFVTKMEECMGACDCVITKAGPGTIAEAMIRGLPIILNDYIAGQEAGNVPYVVENGCGKYSKSPKAIAKIVADWFGPKADELKTMSQNALKLARPDSVFKIVHDMHELVKQRSLLSEYSCTA* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3468 539 Pfam Glycosyltransferase family 28 C-terminal domain 389 479 IPR007235 GO:0016758
Tpr1g3468 539 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 94 529 - -
Tpr1g3468 539 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 150 526 - -
Tpr1g3468 539 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 94 529 - -
Tpr1g3468 539 Gene3D Glycogen Phosphorylase B; 341 510 - -
Tpr1g3468 539 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 163 331 IPR009695 GO:0009247|GO:0016758
Tpr1g3468 539 CDD GT28_Beta-DGS-like 152 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3468 Tpr-Chr1 38942931 38949514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3468 1 539 Glycosyltransferase AT4G31780 65.210 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3468 K03715 - gmx:100804814 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3468 1 38942931 38949514 Tpr1g3468 1 38942931 38949514 ECH