Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3443 ATGCAGGAAGAAAAAAATCAAGAAGATTCAATTTCTGAATCTAATGAACAAAATGAAGAAACAAAGTCAAAGGGTGTTTGGATTTGTAACATTTTTTGCATTCCAATTCATTGGTTTAAAATGCTTTCAAGAGAAATGCATTGGAGTTTTGTTTTTGGAGTTGTTGTTGTTTATGGAATAAGTCAAGGTGTTGGTGGTGCTCTTGCTGGTGTTGGAACAAAGTATTATATGAAAGATGTTCAGAAAGTTCAACCTTCTGAAGCACAGGTTTATGCTGGAATCACTTCTATTCCTTGGATTGTTAAGCCTTTATGGGGTCTTCTTACTGATGTTCTTCCTATTTTTGGATACCGTAGAAGACCTTATTTCATTTTTGCTGGTTTATTAGGAGCAATCGCCATGCTTTTGCTATCTTTCCATGAAAACCTGCATCTTGTGTTGGCACTTTTAGCATTAACAGCAGGGAGTGCTGGTGTTGCAATAGCCGACGTGACCATTGATGCATGTGTTGCACAGAACAGTATCTCTCATCCTTCCCTTGCTGCTGATATGCAAAGTTTATGTGCCTTTAGTTCTTCTGTTGGAGCGCTATTAGGATTCTCCGTTAGTGGTATCTTTGTTCACCTTATAGGCCCTATGGGAGTATTTCGTTTGTTGACTATTCCGGCGGGACTTGTAATTTTGGTTGGTTTTCTACTTGACGAGCCTCGAATGGAAAACTTCTCTTATAGACAGGTGAACCGAAATTTTGTGGATGCTGGCAAGGCTATGTGGACTACATTGAAGAGTGAAGATGTATGGAGGCCTTGTTTATACATGTATTTATCCCTTGCACTAAGTTTGAATATCCTTGAAGGAATGTTTTACTGGTATACAGACTCGAAGGAGGGGCCATCTTTCTCTCAGGAGAGTGTAGGTTTCATATTTTCAATCAGTTCAGTCGGTTCTCTTCTAGGCGCAATACTATACCAATATGCGCTAAAGGATTACGCGTTCAGAGACGTACTCTTTTGGACTCAGTTACTCTATGGTCTATCAGGGATGTTTGATCTGATTTTAGTCTTGAGATTGAACCTCAAATTTGGTATACCAGATTACGTCTTTGTTGTGATTGTCGAAAGCATAGCTCAAATGACAAATAGACTAAAGTGGATGCCGATGCTTGTACTAAGTTCAAAGCTTTGTCCTTCTGGTATTGAAGGAACATTCTTTGCTCTATTAATGTCAATCGATAACGTTGGACTTCTATCATCATCTTGGGGTGGTGGATTAGTACTTCATGTTCTAAAGATCACAAGAACAAAGTTTGATAACATTTGGTTGGCGATTTTGATTCGGAACATTTTACGACTCACTCCACTTTGTATGCTGTTTTTGGTGCCTAGAGTTGATCCTAACTCTTTCATTCTTCTTCCAAAAGAAAATGTGGATCCAAAAGTGGATGCTATTGACACTTCAGAAACAAAAGATGTTGAATTGATGTCCCTTGTACACAGTGTTGATGGGAAAATATAG 1515 0.3861 MQEEKNQEDSISESNEQNEETKSKGVWICNIFCIPIHWFKMLSREMHWSFVFGVVVVYGISQGVGGALAGVGTKYYMKDVQKVQPSEAQVYAGITSIPWIVKPLWGLLTDVLPIFGYRRRPYFIFAGLLGAIAMLLLSFHENLHLVLALLALTAGSAGVAIADVTIDACVAQNSISHPSLAADMQSLCAFSSSVGALLGFSVSGIFVHLIGPMGVFRLLTIPAGLVILVGFLLDEPRMENFSYRQVNRNFVDAGKAMWTTLKSEDVWRPCLYMYLSLALSLNILEGMFYWYTDSKEGPSFSQESVGFIFSISSVGSLLGAILYQYALKDYAFRDVLFWTQLLYGLSGMFDLILVLRLNLKFGIPDYVFVVIVESIAQMTNRLKWMPMLVLSSKLCPSGIEGTFFALLMSIDNVGLLSSSWGGGLVLHVLKITRTKFDNIWLAILIRNILRLTPLCMLFLVPRVDPNSFILLPKENVDPKVDAIDTSETKDVELMSLVHSVDGKI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3443 504 Gene3D MFS general substrate transporter like domains 44 446 IPR036259 -
Tpr1g3443 504 TIGRFAM fbt: folate/biopterin transporter 45 465 IPR004324 GO:0016021
Tpr1g3443 504 PANTHER FOLATE-BIOPTERIN TRANSPORTER 2-RELATED 17 502 - -
Tpr1g3443 504 Pfam BT1 family 62 229 IPR039309 -
Tpr1g3443 504 Pfam BT1 family 272 462 IPR039309 -
Tpr1g3443 504 SUPERFAMILY MFS general substrate transporter 50 459 IPR036259 -
Tpr1g3443 504 Coils Coil 4 24 - -
Tpr1g3443 504 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 17 502 IPR039309 -
Tpr1g3443 504 CDD MFS_FBT 73 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3443 Tpr-Chr1 38739625 38748805 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3443 - - ccaj:109816000 829.32