Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3428 ATGCTATGTAAAATCAAACCCTTGTCACGGAAGAAAAAATCCGGTTCGGTTCCGGTTTATATTAACGTCTATGATCTTACCCCAATTAATGGTTATGCTTATTGGTTTGGCCTTGGAGTTTATCATTCTGGTGTTCAAGTTCATGGTATTGAATATGGATTTGGAGCACATGACCGTGATACTACTGGGATTTTTGAAGTGGAGCCGGGAAAATGTCCAGGATTCACATTTAGAAAATCAATTTACATTGGATCAACGGATATGGGACCAAAGGAGGTTCGGGAGTTTATGGAGAAGCTAGCTGAAGTGTATGCTGGAAATACCTACCATCTTATACAAAAGAATTGCAACCATTTCTGTAATGATGTTTGTGTCAGATTAACAGGAAAGTCAATTCCTCGATGGGTTAATAGACTCGCTAGAATTGGTTTTCTCTGCAACTGCGTTCTTCCAACTAGCCTAAATGAAACAAAGGTTGGACAAGGTACATTAGACAAGACTCGGGAAGGAGAAACTAAGAAAATGAGAAGTCAGTCCCGCAGGCACGAGGCTTCTTCCAGTCCTTCATTGTCTGCTAGCCAAAGACATTGCCTTCCTCCATCTTCGTGTGTAATTAATACTTCTTCATCCTCAACCTTAGCAGTAAAGTAA 651 0.404 MLCKIKPLSRKKKSGSVPVYINVYDLTPINGYAYWFGLGVYHSGVQVHGIEYGFGAHDRDTTGIFEVEPGKCPGFTFRKSIYIGSTDMGPKEVREFMEKLAEVYAGNTYHLIQKNCNHFCNDVCVRLTGKSIPRWVNRLARIGFLCNCVLPTSLNETKVGQGTLDKTREGETKKMRSQSRRHEASSSPSLSASQRHCLPPSSCVINTSSSSTLAVK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3428 216 MobiDBLite consensus disorder prediction 182 200 - -
Tpr1g3428 216 Gene3D PPPDE domains 12 169 IPR042266 -
Tpr1g3428 216 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Tpr1g3428 216 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 214 - -
Tpr1g3428 216 PANTHER DESUMOYLATING ISOPEPTIDASE 2 214 IPR008580 GO:0008233
Tpr1g3428 216 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Tpr1g3428 216 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
Tpr1g3428 216 MobiDBLite consensus disorder prediction 162 181 - -
Tpr1g3428 216 MobiDBLite consensus disorder prediction 160 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3428 Tpr-Chr1 38595264 38598381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3428 K22763 - gmx:100810627 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3428 1 38595264 38598381 Tpr7g0683 7 6044231 6046639 PCT