Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3423 ATGGAACCCGAAGTAAGCATCGAAGGATCATCAACGATCCAAATCGCCGTCATTCCAATCGGAACAGTCCCTCCCAACGTCCTCCGTGACTACTACTCAATGCTCCTCCCTGTCCACACAATCCCTCTCTCTGCAATCAGTTCCTTCTACACTGAACACCAAAAATCACCTTTCGCAAATCAACCTTGGGATTCCGGTTCAATCCGGTTCAAATTCGTCCTCGGAGGTTCTACTCCAAGTCCATGGGAAGATTTTCAATCTCACCGTAAAACCCTCGCTGTTGTTGGCATTGTTCATTGTCCTTCTTCGCCGGATCTTGACGCTGTTATCGATCAATTCTCAAATTCTTGTAAATCTTATCCTTCTTCACTTGTTGATCGTTGCTTCGCTTTTTACCCTAACGATTCTCAGCTTGATGATGGAAGTAAGAGAGATGGAAATTTGAGATTGTTTCCGCCTGCGGATCGGTCCACATTAGAGTTTCATTTGAATACTATGATGCAAGAAGTAGCTGCTTCGTTGTTAATGGAGTTTGAGAAGTGGGTGCTTCAAGCGGAATCTTCTGGAACTATTCTCAAGACACCTTTGGATTCACAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAACGGAGACTTGGGCGTGCTCAGAAGACGATTGGTGATTACTGCTTGCTAGCAGGTTCTCCTGTTGATGCTAATGCTCATTATTCCACTGCATTAGAACTTAGCAGGTTGACTGGGGATTTCTTTTGGTATGCTGGAGCATTGGAGGGTAGTGTTTGTGCCTTGCTGATCGACCGTATGGGCCAGAAAGATTCAGGCGTGGAGGAGGAAGTTAGATATCGTTATAATAGTGTCATCTTGCATTACAAGAAGTCACAAGATAATACTCAGCGAGTTTCTCCCATAACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTCCTCTGCAGGAGAGAGCTGGCCAAGGAGGTAGTGGAGTTATTAACCACAGCTGCAGATGGGGCTAAATCTTTAATTGATGCAAGTGATCGACTCATATTATACATTGAAATAGCTCGTTTGTATGGCAGTCTTGGATACCAGAGAAAAGCGGCTTTCTTTTCAAGGCAGGTTGCTCAGTTATATTTGCAGCAAGAAAATAGGCTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACCACTAAAGCTTATCATGTTCAAAGTAGATCATCAATCTCCGATCATTCTATTATTCATAATAAGGGAATTGGATCAGATAAAGCTGATGCTGGGAAAATACATCACCAATCAGTTGTCTCATTGTTTGAGTCTCAATGGAGTACCATCCAGATGGTTGTATTAAGAGAAATTCTGCTCTCTGCAGTTCGTGCCGGAGATCCTCTTACTGCATGGAGTGCAGCGGCACGACTACTTAGGTCCTACTATCCTCTAATAACTCCTGCTGGGCAAAATGGTCTTGCTAATGCACTTTTGAATTCGTCTGAGAGGCTACCACCAGGGACTCGTTGTGCTGATCCCGCTTTACCTTTTATAAGGGTGCATTCCTTTCCTGTCCACCCAACACAAATGGACATTGTAAAACGTAATCCTGCTAGAGAAGACTGGTGGGCGGGTGCTGCTCCCTCAGGCCCTTTCATTTACACTCCATTCAGTAAAGGAGATACAAATAATATCAAGAAGCAAGAGCTTATTTGGATTGTCGGAGAGCCGATCCAGGTTTTAGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGAGTCGATAGCATCTATCTGTCTGTGCATTCAGGAAATTTTGATGCTTTTCCTGTGAGCATAAGCCTTTTACCAAATTCTTCAAAAGTGATTACCTTATCTGGTATTCCAACATCAGCGGGGCCAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAACACTTGTTTAGAGAGGTTGACAATCTGCTTCTTGGGGCTGCACAAGGGCTTGTCCTTTCTGACCCTTTTCGATGCTGTGGATCTCCAAAGTTGAAAAATGTATCTGTTCCAAGTATTTCTGTAGTACCGCCCCTTCCATTGCTGATATCACATGTTGTTGGAGGTGATGGGGCCATTATTTTGTACGAAGGAGAAATTCGTGATGTGTGGATAAGTCTGGCTAATGCAGGCACAGTTCCAATTGAGCAGGCACATATTTCACTGTCAGGGAAAAATCAAGATTCTGTAATTTCATATTCTTCTGAAACATTAAAATCCAGCCTCCCTCTAAAACCTGGAGCAGAAGTGACATTCCCAGTGACTTTGCGAGCCTGGCAGATTGGTGTGGCAGATGCTGATAATACGAGACATTCCAAAGATGGAAGTTGCCCATCGCTATTGATCCACTACGCTGGTCCACTTAGAACCTCTGAAGATCCAAATGCTGTATCCCCCGGTAGACGCCTTGTTGTTCCCCTGCAGATTTGTGTTATGCAGGGTTTGTCTTTTGTGAAGGCTCAACTGCTTTCAATGGAATTTCCTGCTCATGTTAGTGAAAATCTTCCCAAGTTAGATGATGTAAATAATAATTCTACCGGAGAACATGTTAACTCTGAGTCAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGCTGGGGACTGCGGTTTCTAGAACTTGAGCTGTCGAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAAAACAGCAATAATAATGAGGACAACCATTTAGCTGATCAGGGTGCTACAGAATATGGTTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCAAGAGTTCTTGTGCCGCTTGAGCATTTTAAATTACCTGTTCTTGATGATTCCTTTTTATCGAAGGACACTCAGACAGATGGGACTGGTGGTGGAAGAAACGCGTCATTCTCTGAAAAGAACAGCAAAGCCGAACTCAATGCTTGTATCAAGAACCTTGTATCTAGGATTAAGGTTCAGTGGCATTCGGGACGCAATAGCTCTGGAGAGTTAAATATCAAGGATGCTATCCAGGCTGCTCTACAGACATCAGTCATGGACGTGTTGCTGCCAGATCCACTGACATTTGGCTTCAGGCTTCTTAGAGAGGGTTTTCAATCAGATAGTGCTGACCCCATGAAAGAATCTGATTTACCTGAATCCCCGGCTTCAAAAAGTTCTGTTCTTGCACATGAAATGACACCAATGGTAGTTGTGGTCCGTAATAACACAAAGGATATGATCAAAATTAATCTTAATATTACATGCAGAGATGTATCTGGGGAGAACTGTGTAGATGGTACCAAATCAACTGTTCTATGGACTGGTGTTCTGAGTGAAATTACCATTGAAATTCCCCCGCTTCAACAAATCACACATTCTTTCTGCTTGCATTTCCTTGTCCCAGGAGAGTATACCCTACTCGCTGCAGCAGTGATCGATGATGCGAATGATATCCTTCGGGCTCGTGCTAAGGCAACTTCAGCTGCTGAGCCTATTTTTTGCCGTGGACCACCATATCACCTTCGTGTCCTTGGGAATGCATGA 3567 0.4329 MEPEVSIEGSSTIQIAVIPIGTVPPNVLRDYYSMLLPVHTIPLSAISSFYTEHQKSPFANQPWDSGSIRFKFVLGGSTPSPWEDFQSHRKTLAVVGIVHCPSSPDLDAVIDQFSNSCKSYPSSLVDRCFAFYPNDSQLDDGSKRDGNLRLFPPADRSTLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDFFWYAGALEGSVCALLIDRMGQKDSGVEEEVRYRYNSVILHYKKSQDNTQRVSPITFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYQRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSIIHNKGIGSDKADAGKIHHQSVVSLFESQWSTIQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALLNSSERLPPGTRCADPALPFIRVHSFPVHPTQMDIVKRNPAREDWWAGAAPSGPFIYTPFSKGDTNNIKKQELIWIVGEPIQVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSISLLPNSSKVITLSGIPTSAGPVTIPGCIVHCFGVITEHLFREVDNLLLGAAQGLVLSDPFRCCGSPKLKNVSVPSISVVPPLPLLISHVVGGDGAIILYEGEIRDVWISLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSSLPLKPGAEVTFPVTLRAWQIGVADADNTRHSKDGSCPSLLIHYAGPLRTSEDPNAVSPGRRLVVPLQICVMQGLSFVKAQLLSMEFPAHVSENLPKLDDVNNNSTGEHVNSESKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSNNNEDNHLADQGATEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFLSKDTQTDGTGGGRNASFSEKNSKAELNACIKNLVSRIKVQWHSGRNSSGELNIKDAIQAALQTSVMDVLLPDPLTFGFRLLREGFQSDSADPMKESDLPESPASKSSVLAHEMTPMVVVVRNNTKDMIKINLNITCRDVSGENCVDGTKSTVLWTGVLSEITIEIPPLQQITHSFCLHFLVPGEYTLLAAAVIDDANDILRARAKATSAAEPIFCRGPPYHLRVLGNA* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3423 1188 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1186 - -
Tpr1g3423 1188 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1186 IPR013935 -
Tpr1g3423 1188 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 191 IPR013935 -
Tpr1g3423 1188 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 269 IPR013935 -
Tpr1g3423 1188 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 744 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3423 K20306 - gmx:100784850 2093.55