Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3420 ATGGGTTGTGGAAACATGTTTTTCACAATTCTGATAACATTTTCAGTAACATTAATAACATACAACATCATAATATCAGGAAATGCTCCATTGAAACAAGATTTTCCTGGTCCAACACGTCGTCCTTCAATTACTATAGACCCAATAATCAAGATGCCACTTAACAAAAAACCTTCTTCTTCAAAGAGATTATTTCATACTGCAGTTACAGCTTCTGATTCACTTTACAATACATGGCAGTGTAGAGTTATGTATTACTGGTTCAAAAAGATGAAAGAAAGTGGTCATTCTGATATGGGTGGATTTACAAGAATTTTGCATTCTGGTAAAGCTGATCAGTATATGGATGAGATCCCTACTTTTGTTGCTCAACCTTTGCCTTCTGGAATGGATCAGGGTTACATAGTCCTTAATAGACCATGGGCCTTTGTACAGTGGCTTCAACAAGCAGATATCAAAGAAGACTACATATTGATGTCAGAGCCAGATCATATAATTGTGAAACCTATACCTAACTTAGCCAGAGATGGAATGGGAGCTGCATTCCCTTTCTTTTATATTGAGCCTAAGAAATATGAGACAGTACTAAGAAAGTACTTCCCTGAGGAAAATGGACCTGTAACCAATATAGATCCAATTGGGAATTCACCTGTAATTGTTGGCAAGGAATCCCTTAAGAAGATTGCTCCTACTTGGATGAATGTTTCCCTGGCAATGAAGAAAGATCCTGAAACTGATAAAGCTTTTGGATGGGTGCTTGAAATGTATGCTTATGCAGTTTCTTCTGCTCTTCACGGTGTTCATAACATATTGTTCAAGGACTTCATGATTCAGCCTCCATGGGACAAACAACTTGGTAAAACATACATAATTCACTACACTTATGGGTGTGACTATTCAATGAAGGGTGAAATGACTTATGGAAAAATTGGAGAATGGAGGTTTGATAAAAGATCTTATGATCTTGTTGCTCCAAAAAATCTGACATTGCCACCACCTGGTGTTCCAGAGAGTGTGGTGACTCTCGTAAAAATGGTTAATGAAGCTGCAGCAAATATTCCAAACTGGTAG 1071 0.3754 MGCGNMFFTILITFSVTLITYNIIISGNAPLKQDFPGPTRRPSITIDPIIKMPLNKKPSSSKRLFHTAVTASDSLYNTWQCRVMYYWFKKMKESGHSDMGGFTRILHSGKADQYMDEIPTFVAQPLPSGMDQGYIVLNRPWAFVQWLQQADIKEDYILMSEPDHIIVKPIPNLARDGMGAAFPFFYIEPKKYETVLRKYFPEENGPVTNIDPIGNSPVIVGKESLKKIAPTWMNVSLAMKKDPETDKAFGWVLEMYAYAVSSALHGVHNILFKDFMIQPPWDKQLGKTYIIHYTYGCDYSMKGEMTYGKIGEWRFDKRSYDLVAPKNLTLPPPGVPESVVTLVKMVNEAAANIPNW* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3420 356 PANTHER PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE 1 356 IPR044845 GO:0016757
Tpr1g3420 356 PANTHER HYDROXYPROLINE O-ARABINOSYLTRANSFERASE 1 1 356 - -
Tpr1g3420 356 Coils Coil 346 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3420 Tpr-Chr1 38508578 38513271 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3420 K20782 - gmx:100813136 665.225