Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3412 ATGGGTTTCAGATATAAAGCAGGATTGTTCCTTATAGGTACTGTTGTTATCATTTGGGTCTCTTCTGCTGAAGTCACCCAGGATATATATACAGATTATAAGCAGCCATTTGCGGTGACATATCTTGGAGCTTCTCTCATGGTAGTTTACCTCCCAATAGCATTCATTAAGGATTGGTTCTGTAAATTGCTTAAACACCGCTCTTCTAAAAGTGGAAATAATGCAGACAGTGGCTCCCCATTCAAAGGAAATGGTGCGCAGAAAATGTTTGAAATGGAACAAGGGATTGTGGCTCGAAAAGACAGTGATTTAGACCTTCCATCTCTTGCAGAGAAAGCACCATTGGTGGCTAAGTATAATGAAACTAGTGTGGCAAAGGAAGAAAAACAACTTACTACAAAGGAAATTGCTACTTATGGATTTTACATTGCACCTATCTGGTTTATCACAGAGTATCTATCAAATGCTGCACTTGCACGTACAAGTGTTGCGAGTACAACAGTATTGTCATCTACTTCAGGACTATTCACTCTTTTCATCGGTGTGTTAATGGGCCAAGACACTATAAATGTATCAAAAGTAGTTGCTGTATTGGTCAGCATGGCTGGGGTTGCCATGACAACTCTAGGCAAAACTTGGGCTGCAGATGACTCGCAACTTAGTGCTTCCAATGGACCGCGCTCTCTTGTTGGAGATCTTTTTGGCCTTCTCTCAGCCATGTCATATGGTCTATTTACTGTTCTTCTGAAAAAGTTTTCCGGCGAAGAAGGTGAACGGGTTGATGTGCAAAAGCTGTTTGGATATATTGGATTGTTTACACTTGTAGCACTATGGTGGCTTATCTGGCCGTTATCGGCCTTAGGAATTGAACCTAAGTTTGCGATTCCCCACTCTGCCAGAATGGATGAAGTAGTTCTTGCAAATGGGTTTGTTGGAAGTGTTCTCTCAGACTACTTTTGGGCACTCTGCGTTGTATGGACAACTCCCCTTGTAGCCACTTTGGGCATGTCACTCACCATTCCACTTGCTATGATAGCTGACATGGTAATCCATGGTCGGCATTATTCAGCATTATACATTCTTGGCTCAGTTCAGGTATTTGCAGGGTTTGTGATAGCTAATATTTCAGATTGGATGACAAAGAGGTTTGGATTGTAA 1158 0.418 MGFRYKAGLFLIGTVVIIWVSSAEVTQDIYTDYKQPFAVTYLGASLMVVYLPIAFIKDWFCKLLKHRSSKSGNNADSGSPFKGNGAQKMFEMEQGIVARKDSDLDLPSLAEKAPLVAKYNETSVAKEEKQLTTKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSSTSGLFTLFIGVLMGQDTINVSKVVAVLVSMAGVAMTTLGKTWAADDSQLSASNGPRSLVGDLFGLLSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLSALGIEPKFAIPHSARMDEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMIADMVIHGRHYSALYILGSVQVFAGFVIANISDWMTKRFGL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3412 385 Pfam EamA-like transporter family 129 208 IPR000620 GO:0016020|GO:0016021
Tpr1g3412 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 129 211 - -
Tpr1g3412 385 PANTHER OSJNBA0070O11.5 PROTEIN 1 382 - -
Tpr1g3412 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 270 379 - -
Tpr1g3412 385 PANTHER SOLUTE CARRIER FAMILY 35, MEMBER F5 1 382 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3412 K15289 - gmx:100792013 624.394