Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3403 ATGACTTTCTCCGCCGCCGCATCATCTTCTCTTCGTTCTACCTCTTCTCCTTCCTACTCGCAGTTGTCGTGCTCTCTTAGGTACAATAGGAAGCTTCGTAGTCAAATAAATTTTGTTGTGACTCGAGGAAGAAAAGGTCGATGGTTAAGGAATGGTTGTGTTAGTGTTAGATCAGTGTTGAATGACAATAGACCTAGTTTTAACAATTATGGAACGCCGGAATCTGCTAGGCTTCTTGAGAGGTTGTTTGAACAGACGCACAAGCTGGATGATAGGGTGATTGGAGAGGATGCAGATCTTGGTGATTTTGAGACGGATCTTTTGGCGGCTCTTATGGAATTGAAGGTGAAGGAGGATCATTTACATGAAGTGGAGAGAACTGTTTTGTTGGAGAATGGAAAATTGAAACATGCTAAAGAGGAATTAGAGCGTCAAGAGAATGAAATTGAGGCTGCCCGTGAGAAGTATGAGAGGCTTGAAGAGGAGATGAAGGAGGCGAGGGCTAGTTTGGTTTCTCAAGTTGGACAGGTAGATGAATTGAAGCTCCGGCTTACGGATCGTGATAATGAGATTGCAGGTTTACGGGATGCGCTGTCTTTGAAGGAAGAAGAGTTGGAGAAAATGAGGATTGGTTTGGCTAAGAAGAGTGAAGAAGCTGCTTATGTTGATTCTGAGCTTAGAAATAAGCTTCAGCTTCTGAGTGAAGCTAATGAGGTTGTGAAGAAACAAGAAATTGAGCTTCAAGAACTTCGGGCAGTTGTATTACAAAGAGAAGAAGAACTACGAGTTTCTGCGGCTGAGAGGGAAGTTGAACAAGAAAAGCTCAAGATTGCGGAGGCTTCTTTGGAAAGGCAGGCAATGGAATGGTTGTTAACACAGGGGGAACTTAAGAGACTGGAAGAGGAGGCGTCGAGGCATGCACAGGAGAACAGTGAAACACTAGAGGATTTCAGAAGGGTGAAAAAGCTTCTCAGTGATGTGAGGTCTGAATTAGTTTCATCTCAGCAATCGCTGGCATCTTCTAGGAACAAAATGGAAGTACAAGAAAGGTTGTTGGAACAGCAGATGGCGGAACTTTCAGACCAAAGGGAAAGTGTCATGTTGTATATGGAAAATTTAAAAGATGCACAAAGAGAAGTAGAGAGTGAAAGAACGAAACTTGGGGTTGCAGAGGCTTTGAATAAAAAACTCGAACAAGATCTGTCCATGGAGAAGGAGCTCATGAAGAAGTTACAGGAGGAGCTGAAGGAAGAGAGAGCTTCTTTGGAGCAGGCTGTTCATGAATTGTCTTTGCTTCAACAGGAATTTGATATAAAAAGTGTTGAATTTAAGGAAAAAAGTGCCCTTCTTGATATCAAAGAGTCAGAGCTTGTTGATGCTAAGCTAGAAATCCAACATTTGAAATCTGAAAAGGCTTCTCTTCTGGTTCTCTTGGAGGAGAAAGACTTGGAGCTTTCTAATGCTAGGAAGCTGCTAGCGGAACTAAACCAGGAAATCTCTGATCTTAAGATGCTTATGAACAACAAAGAAACACAGCTTATTGAAGCAACCAATATGTTAAGGGAGAAAGATGAGCATGTGAAGATGATCCAGAATAAGTTGAATAATACAAGCCTGAAGGCTTTCGAAGCTGAAACTGTAGTAGAACGAGTTTTAGATCTCACAAACAAACTGGTTGCTTCCATTCAGAATGAAGACATTAATTCATATAGGCCACTAGATGAAATGGGTGATCAACTAATGACGCAACTTTTGGAAGATCCTACTAATGAATTGAGTTGGCAACAAAAACGGCTGGAGAATGTGCTCGAGTTGACCAAGGAAAACTTAAAAACAAAGGAGATGGAAGTTCTTGCTGCACAGAGGGCCCTAATAATAAAAGAAGAGGAGCTTAAAATGACTCTTGCAAGGTTGGAAGCAAAAGAGGAAGAGTTAAGAGGAGCAAAGGACAAGGCGACAGAAGATGCTAATGATCATAATAGGTTGTATGCTATGACGCAGGAGAGACTCAATGAGAATAATATGGAGGACTTGGCAATCGAGAAGCTTCAGCTTGAGGCAGCACAGCTTGAAGTTGAAGCTGCTACTAGTGCTCTACAGAAAATTGCAGAAATGAGTCAACAACTTTTGAATAAAGCCATGCCGAGTGTTAAAGCTGATAGCTGTATCAGTGCCATGCAAAATAACAATAATATTAAACTTGATTTAATCACAAATATCAATTGCATTGATTGTTTGGCTGTGGTGAAAGCAGGAGTTGCTCGACTCTCGGCATTGACAGAACAGCTCGTGATGGATGCAGGTCTTCCTGCTGCAAGCTAG 2322 0.4173 MTFSAAASSSLRSTSSPSYSQLSCSLRYNRKLRSQINFVVTRGRKGRWLRNGCVSVRSVLNDNRPSFNNYGTPESARLLERLFEQTHKLDDRVIGEDADLGDFETDLLAALMELKVKEDHLHEVERTVLLENGKLKHAKEELERQENEIEAAREKYERLEEEMKEARASLVSQVGQVDELKLRLTDRDNEIAGLRDALSLKEEELEKMRIGLAKKSEEAAYVDSELRNKLQLLSEANEVVKKQEIELQELRAVVLQREEELRVSAAEREVEQEKLKIAEASLERQAMEWLLTQGELKRLEEEASRHAQENSETLEDFRRVKKLLSDVRSELVSSQQSLASSRNKMEVQERLLEQQMAELSDQRESVMLYMENLKDAQREVESERTKLGVAEALNKKLEQDLSMEKELMKKLQEELKEERASLEQAVHELSLLQQEFDIKSVEFKEKSALLDIKESELVDAKLEIQHLKSEKASLLVLLEEKDLELSNARKLLAELNQEISDLKMLMNNKETQLIEATNMLREKDEHVKMIQNKLNNTSLKAFEAETVVERVLDLTNKLVASIQNEDINSYRPLDEMGDQLMTQLLEDPTNELSWQQKRLENVLELTKENLKTKEMEVLAAQRALIIKEEELKMTLARLEAKEEELRGAKDKATEDANDHNRLYAMTQERLNENNMEDLAIEKLQLEAAQLEVEAATSALQKIAEMSQQLLNKAMPSVKADSCISAMQNNNNIKLDLITNINCIDCLAVVKAGVARLSALTEQLVMDAGLPAAS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3403 773 Coils Coil 226 283 - -
Tpr1g3403 773 Coils Coil 478 512 - -
Tpr1g3403 773 Coils Coil 596 658 - -
Tpr1g3403 773 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 36 768 - -
Tpr1g3403 773 Coils Coil 338 435 - -
Tpr1g3403 773 Coils Coil 450 470 - -
Tpr1g3403 773 Coils Coil 128 176 - -
Tpr1g3403 773 Coils Coil 673 705 - -
Tpr1g3403 773 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 36 768 - -
Tpr1g3403 773 Coils Coil 296 316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3403 - - gmx:100789623 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3403 1 38348032 38351865 Tpr1g3403 1 38348032 38351865 ECH