Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3400 ATGTCTCTCAAATCATCCAATTCCTCGGAGAAACCGATTCTTCCTTTATCGGATCCTCCAAAAAACCAACCCGATGACAAACTTTTCAAAGGTTCCGCTATGACCAAACGTGGTGCATACGCCGCTATTTCTTACATGACCTGCGCAGTTATGTTGGTGATGTTTAATAAAGCAGCTCTTTCGTCTTATAACTTTCCATCTGCAAATGTAATCACACTTCTTCAGATGTTTAGTTCGTCTTGTTTTCTTTATGTATTGAGGCGCTGGAGGATAATTAGTTTTACAGCAAGTGAATCTTTGCATATATCAGATACTTCAACAAAATTTGTATCACTCAAGACTTTGAAACACACTTTTCCTTTGGCTGGAGCATATTTATTTTACATGCTAGTGACCATGGAGGCTGTTCGGGGAGTAAATGTTCCAATGTATACAACTTTGAGGAGGACCACAGTGGTATTTACAATGCTTGTAGAGTTTCTTTTGGTGGGACAGAGGTATACACACTCTGTCGTCTTCAGTGTTGGCTTGATTATCTTTGGTGCGTTTGTTGCGGGAGCACGAGACTTATCTTTTGATGGTTATGGATATGGTGTTGTTTTCTTGGCAAACATCAGCACAGCAATATATCTCGCTACCATAGCCCGCATCGGAAAAACTAGCGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATTCTATGTGGGCCAGTTTTACTCATCTGGACATTTATCCGCGGAGACTTGACGATGACAATCAACTTTCCTTATCTCTTCTCACCTGGTTTTCTCGTTATTTTGCTTTTTTCATGCATACTGGCATTCTTCTTGAATTACTGTATATTTCTGAACACAACTCTAAATTCAGCTCTGACGCAGACAATTTGCGGCAATCTGAAGGATCTATTTACTATTGGATTTGGCTGGATAATTTTTGGTGGGCTACCATTTGATTTTTGGAATGTAATTGGACAATGTCTCGGTTTTGCTGGTTCTGGTTTATATGCTTACTTTAAGCTCATTGGCAAATAA 1035 0.3961 MSLKSSNSSEKPILPLSDPPKNQPDDKLFKGSAMTKRGAYAAISYMTCAVMLVMFNKAALSSYNFPSANVITLLQMFSSSCFLYVLRRWRIISFTASESLHISDTSTKFVSLKTLKHTFPLAGAYLFYMLVTMEAVRGVNVPMYTTLRRTTVVFTMLVEFLLVGQRYTHSVVFSVGLIIFGAFVAGARDLSFDGYGYGVVFLANISTAIYLATIARIGKTSGLNSFGLMWCNGILCGPVLLIWTFIRGDLTMTINFPYLFSPGFLVILLFSCILAFFLNYCIFLNTTLNSALTQTICGNLKDLFTIGFGWIIFGGLPFDFWNVIGQCLGFAGSGLYAYFKLIGK* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3400 344 Pfam Triose-phosphate Transporter family 46 336 IPR004853 -
Tpr1g3400 344 PANTHER BNAA08G30680D PROTEIN 17 344 - -
Tpr1g3400 344 MobiDBLite consensus disorder prediction 1 28 - -
Tpr1g3400 344 PANTHER SOLUTE CARRIER FAMILY 35 17 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3400 Tpr-Chr1 38333375 38338494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3400 36 280 Organic Solute Cotransporters AT2G13650 23.810 5.64e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3400 K15281 - gmx:100819763 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3400 1 38333375 38338494 Tpr1g3400 1 38333375 38338494 ECH
Tpr1g3400 1 38333375 38338494 Tpr7g0651 7 5735321 5739982 PCT