Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3394 ATGAAGTTCTGGAAGATTCTCAATAATCAGATCGAACAAACGTTACCGGATTGGCGTGACAAGTTTCTTTCTTACAAGGATCTTAAGAAACAGTTGAAACTAATTGATCCTAAAGATTCTTCTTCTTCTTCGTCGAAACGACGTCGTTTGGATGACGACGGTGCAACCACCACGGATGGCGGCGAGGTGACGAAAGAGGTTAATGATTTTCTGAAGTTGTTGGAGGTTGAAATTGAGAAATTCAATGGTTTTTTTGTTGAGAAGGAAGAAGAATATGTTATCAAATGGAAGGAATTGCAAGACAAAGTGGCCTGGGCCAAGAATTCTGATTTAGAGTTGATGACAGTAGGGAGGGAAATAGTGGATTTTCATGGAGAGATGGTTTTATTAGAGAACTACAGTGCACTTAACTACACAGGTTTGGTTAAGATAATAAAGAAATATGATAAGCGAACTGGTGCGCTACTTCGATTACCTTTTATCCAAGATGTCTTGAACCAACCGTTCTTCAAAATTGATGTGCTTAACAAACTTGTAAAGGAGTGTGAGGTGATGCTAAGTATCATTTTCCCCAAAAGTGGTCCTCTAGGTCAATCCTTATCAACCAGTGATGTTTTTGAGGAAGTTTCGCGTGGCTCCACGTCTGCAAATGAAACAAAAGAGACACTCGAGCATGTCCCCAAAGAACTTTCTGAGATCCAAAATATGGAGAACATTTTCATAAAATTAACTACATCAGCACTGGATACCTTGAAAGAGATTCGGGGTGGAAGCTCAACTGTAAGCATATACTCATTACCTCCTATGCATAGTGCCCCTAACAGTGAGACTCTTGTAGAGGATTGA 846 0.3983 MKFWKILNNQIEQTLPDWRDKFLSYKDLKKQLKLIDPKDSSSSSSKRRRLDDDGATTTDGGEVTKEVNDFLKLLEVEIEKFNGFFVEKEEEYVIKWKELQDKVAWAKNSDLELMTVGREIVDFHGEMVLLENYSALNYTGLVKIIKKYDKRTGALLRLPFIQDVLNQPFFKIDVLNKLVKECEVMLSIIFPKSGPLGQSLSTSDVFEEVSRGSTSANETKETLEHVPKELSEIQNMENIFIKLTTSALDTLKEIRGGSSTVSIYSLPPMHSAPNSETLVED* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3394 281 CDD SPX_AtSPX1_like 2 151 - -
Tpr1g3394 281 PANTHER SPX DOMAIN-CONTAINING PROTEIN 1 1 270 - -
Tpr1g3394 281 ProSiteProfiles SPX domain profile. 1 162 IPR004331 -
Tpr1g3394 281 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 270 IPR031142 GO:0016036
Tpr1g3394 281 MobiDBLite consensus disorder prediction 36 58 - -
Tpr1g3394 281 Pfam SPX domain 119 163 IPR004331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3394 Tpr-Chr1 38276883 38280638 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3394 - - adu:107495354 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3394 1 38276883 38280638 Tpr1g3394 1 38276883 38280638 ECH
Tpr7g0633 7 5588610 5590537 Tpr1g3394 1 38276883 38280638 ECH