Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3387 ATGAGAAGAAGAATATGGAATCTTCTCTTCAATTCACCATTCCCAACCTCCAACTTCCGCTTCACTGCGTCTCGTTATTACTGCTCCGATCCATCACGCATTCTCAACCATAACCGTCCAGGACCGCTTGTACAGTACAAAAATCTTGTTAATCAAGGAAAGTTGCAACATGATCCTTACCAAGAAACTGTTGCTACAGAGCTTCAGAATTTGTTAGCAAGGTTGGAGAATTATGAGAGACAAATGGAAGAGTATCATGTTAATTTATCTAAATGGGAGAACAGTAGGGAGAACGAGCGGCGGAGGATTCTTACCGAGGAAGTTGAGAAGCAACAGAACGTCGAGGATTGGTGGAGGCGTTTGAATAATAAAATCACTGAAAGATGGACGACGAACTCTAGGAAGAGGCCAGATAATGTGGATCCAGGGGTAGGAAAATGGGTGTCGTATCTTAAACGTGAGAAGAAGTTGGATTCACTAGTTGGTCGCCGACCAACTGCTCCTCCAGCTCCCAAAGGACTTTACATATATGGCAATGTGGGCAGTGGGAAGACAATGCTGATGGACATGTTTTATAGTGCCACTGAAGGAATAGTTAAACATCGAAGAAGGTATCACTTTCACGAGGCCATGCTTAGAATAAATGAACATATGCACAAGATATGGAAGAAACAAATGGAAGAGAAGCCTTTGCAGTCGGGCATTGCTGGTTGGATTATGAATCTTCCCTTTGACACTAAAGCTAAAGAGTGGCTGGCTGCAGAAGAAAGATACAAGCAAGAGGTACAGATGAAAAACATTCTTCCAGCTGTAGCAGATAAGTTTTTTCTGGATCGAGAAGGGGACGAAAAGGGAGCTAACATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGTTGAGTAGTGGAACTATTATTGTGGCTACAAGTAATCGAGCACCTAAGGATTTGAATGAGGCTGGTATGGTACCGGAATTCTTCCAAAACCTTCTCTCCAATTTGGAAAAGCATTGTGAGACAGTGTTGGTAGGCAGTGAAATTGACTACCGCCGTTTTATTGCACAAAGATCAGTAAACCGGGTAAACTATTTGTGGCCTATTGAAAGGGAAACAATCAATGAATTTGAGAAAAAGTGGCACAATGCAACAGGCACATTTGGAGGAAAAATAATCCCCGACACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCTGAAAGTTGTGGGGGAGTTGCTCGCTTTACATTTGACTATCTCTGTGGTCGGCCGTTGGGTGCAGCAGATTATATTGCAGTAGCGGAAAACTATCATACTGTTTTCATATCTGATATTCCAGTGATGAGTATGCGCATTCGTGACAAGGCACGGAGATTTATCACTCTTATTGACGAGTTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCCTCTTCAATTGACGATTTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTTGAAACAGAGGCTGAAGGCGGGAAACTTCGCCGGGATGTCTTAGCAGAAGGCAACGTGGGCACAGGAGGTACCCCTGTTGGCATCACATCCATACTATCTGGTCAGGAAGAGCTGTTTACTTTTCAGAGAGCTGTCTCGCGCCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTCGGTAATGTCCACCCTTATTTTCAGAGGCAACATAAAAAAATTCAAAAAAAAATTGTGACGGCTTACTGTCCGAGTCATCATTAA 1806 0.4258 MRRRIWNLLFNSPFPTSNFRFTASRYYCSDPSRILNHNRPGPLVQYKNLVNQGKLQHDPYQETVATELQNLLARLENYERQMEEYHVNLSKWENSRENERRRILTEEVEKQQNVEDWWRRLNNKITERWTTNSRKRPDNVDPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKKQMEEKPLQSGIAGWIMNLPFDTKAKEWLAAEERYKQEVQMKNILPAVADKFFLDREGDEKGANILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVPEFFQNLLSNLEKHCETVLVGSEIDYRRFIAQRSVNRVNYLWPIERETINEFEKKWHNATGTFGGKIIPDTISVMFGRTLEVPESCGGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDDLFQGTEEGTLFDLESFQFETEAEGGKLRRDVLAEGNVGTGGTPVGITSILSGQEELFTFQRAVSRLIEMQTPLYLDGVGNVHPYFQRQHKKIQKKIVTAYCPSHH* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3387 601 PANTHER ATPASE N2B 36 591 IPR005654 GO:0005524|GO:0016887
Tpr1g3387 601 Gene3D - 163 364 IPR027417 -
Tpr1g3387 601 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 36 591 - -
Tpr1g3387 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 335 IPR027417 -
Tpr1g3387 601 Coils Coil 61 114 - -
Tpr1g3387 601 Pfam AFG1-like ATPase 155 502 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3387 Tpr-Chr1 38233735 38242579 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3387 - - mtr:MTR_1g012370 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3387 1 38233735 38242579 Tpr1g3387 1 38233735 38242579 ECH