Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3382 ATGAAGAAGATAGTGTTCTTGTTTCTTTCCCTTCTCTTTTGTTCCACCTTCCATGTCTCCCTCTCCCTCATTGATGGGCTAGTGGCAAATGGAAATTTCGAGCTGGGTCCGAAACCAACAGAATTAAAAGGCACAGTCGTAACCGGCGGCAAAAACTCGATACCGGAATGGGAAATATCAGGACTAGTAGAATACATAAAATCAGGACAAAAACAAGGTGACATGTTGCTAGTTGTACCAGAAGGTGCATATGCAGTGAGATTAGGTAATGAAGCATCAATAAAACAAAGAATAAAAGTGATTAAAGGAATGTATTATTCAGTAACTTTTATGGTTGCACGTACATGTGCACAAGAAGAAAGAATTAATATATCTATTGCTCCTGATTTTGGTGTTATTCCAATACAAACATTGTATACAAGTAGTGGTTGGGATCCAATTGCTTATGGTTTTAAAGCTGAATATGATGTTGTGGAAATGGTTATTCATAATCCTGGTGTTGAGGAAGATCCTGCTTGTGGTCCTCTTATTGATTCTGTTGCCCTTAGGACTCTCTACCCTCCTAGACTTACTAAGAACAACATATTAAAGAATGGTGGATTTGAAGAAGGACCTTACATAATCCCAAACTCATCATATGGAGTAATCATCCCACCAAACATAGAAGACGACCATTCACCCCTTCCGGGATGGATGGTAGAATCCTTAAAAGCCGTAAAATACTTAGACTCGGATCATTTCTCCGTCCCCGAAGGAACAAGAGCAATAGAATTAGTAGCCGGAAAAGAAAGTGCAATAGCACAAGTAGCTAGAACAATTCCAGGCAAAACTTATGCACTATCATTTTCAGTTGGTGATGCAAGTAATTCATGTGAAGGTTCAATGATTGTTGAAGCATTTGCTGGTAAAAACACAATTAAGGTACCTTATCAATCTAAAGGTAAAGGTGGATTCAAACGTGCTGTTCTTAAGTTTGTAGCTGTTGGGATAAGAACAAGGGTGATGTTTCTAAGTACTTTCTATAGTATGAGAAGTGATGATCTTTCTTCTCTTTGTGGTCCTGTTATTGATGATGTCAAGTTACTCAGCGTGCGGAAACCTTAA 1104 0.385 MKKIVFLFLSLLFCSTFHVSLSLIDGLVANGNFELGPKPTELKGTVVTGGKNSIPEWEISGLVEYIKSGQKQGDMLLVVPEGAYAVRLGNEASIKQRIKVIKGMYYSVTFMVARTCAQEERINISIAPDFGVIPIQTLYTSSGWDPIAYGFKAEYDVVEMVIHNPGVEEDPACGPLIDSVALRTLYPPRLTKNNILKNGGFEEGPYIIPNSSYGVIIPPNIEDDHSPLPGWMVESLKAVKYLDSDHFSVPEGTRAIELVAGKESAIAQVARTIPGKTYALSFSVGDASNSCEGSMIVEAFAGKNTIKVPYQSKGKGGFKRAVLKFVAVGIRTRVMFLSTFYSMRSDDLSSLCGPVIDDVKLLSVRKP* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3382 367 PANTHER OS02G0527500 PROTEIN-RELATED 7 367 - -
Tpr1g3382 367 Gene3D - 190 362 - -
Tpr1g3382 367 Pfam Protein of unknown function (DUF642) 26 183 IPR006946 -
Tpr1g3382 367 Pfam Protein of unknown function (DUF642) 195 361 IPR006946 -
Tpr1g3382 367 PANTHER PLANT/F18G18-200 PROTEIN 7 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3382 Tpr-Chr1 38193155 38197984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3382 - - gmx:100813910 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3382 1 38193155 38197984 Tpr1g3382 1 38193155 38197984 ECH