Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3375 ATGGTTGGAGAAGGAAGAAAACTAAAGGCAGTGATTGCTGGAGGTAGCATAGCTGGGATATCAACTGCACATGCCCTTATCTTAGCTGGTTGGGATGTCCTTATCCTTGAGAAAACCACCTCACCTCCAACTGGAAGTCCTACTGGTGCAGGTCTTGGACTCAACCCTCTTTCTCAACAAATCATTCAATCTTGGATTTCAAAACCACCACAATTCCTACATAACTCCACTTTTCCACTAACTATTGATCAGAACGAAGCAACGGATAGCGAGAAGAAGGTTAACAGGACATTGATAAGAGACGAAAGTTTCAACTTCAGAGCAGCACATTGGGCTGATCTTCATGGTATTCTCTACAATGCATTGCCGGAAGAAGTATTTTTATGGGGTCATCTTTTTATCTCTTTCCATGTTGCAAATGAAAAGGGTTCTGTCATAATAAAGGCTAAAGTTCTTCAAACTGGAGAGATCATCGAGATTGTAGGAGATTTGCTTGTTGCAGCAGATGGTTGTCTCTCTTCCATCCGCCAAAAATATCTCCCCGATTTTAAACTAAGATATTCAGGCTATTGTGCTTGGAGAGGGGTTCTTGATTTTTCAGAAATTGAGGATTCCGAAACCATCACAGGTATCAAGAAGGCCTATCCTGATTTAGGAAAATGTTTGTACTTTGATTTGGCCTCAGGTACACATAGTGTATTTTATGAGCTTCTGAATAAAAAGCTCAATTGGATTTGGTATGTGAATCAACCAGAGCCTGAAGTGAAGGGAACTTCAGTGACAACGAAAGTAACTAGTGACATGATCCAGAAGATGCACAAAGAAGCAGAAAAAGTATGGATTCCCGAGTTAGCAAAGGTCATGAAAGAAACAAAAGAACCTTTCTTAAATTTCATATATGATAGTGATCCCTTGGAGAAGATATTCTATGACAATGTAGTATTTGTAGGTGATGCAGCTCACCCGACTACACCTCACTGCCTTAGAAGCACAAACATGTCGTTATTAGATGCATCAGTGTTAGGAAAATGCATAGAGAAATGGGGAGCAGAAAAGCTTGAATCAGCTTTGGAAGAGTATCAGTTCATCAGGCTACCAGTTACTTCCAAGCAAGTTCTTCATGCGAGGCGTCTCGGTCGCATCAAACAAGGACTTGTGCTCCCTGATAGAGATCCTTTTGATCCCATGTCTGCAAGGCAAGAGGATTGTCAGGAGCTTTTACAAAGGAACACACCTTTTTTCAATGATGCTCCTTTGTAA 1260 0.4095 MVGEGRKLKAVIAGGSIAGISTAHALILAGWDVLILEKTTSPPTGSPTGAGLGLNPLSQQIIQSWISKPPQFLHNSTFPLTIDQNEATDSEKKVNRTLIRDESFNFRAAHWADLHGILYNALPEEVFLWGHLFISFHVANEKGSVIIKAKVLQTGEIIEIVGDLLVAADGCLSSIRQKYLPDFKLRYSGYCAWRGVLDFSEIEDSETITGIKKAYPDLGKCLYFDLASGTHSVFYELLNKKLNWIWYVNQPEPEVKGTSVTTKVTSDMIQKMHKEAEKVWIPELAKVMKETKEPFLNFIYDSDPLEKIFYDNVVFVGDAAHPTTPHCLRSTNMSLLDASVLGKCIEKWGAEKLESALEEYQFIRLPVTSKQVLHARRLGRIKQGLVLPDRDPFDPMSARQEDCQELLQRNTPFFNDAPL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3375 419 PANTHER MONOOXYGENASE-LIKE 6 418 - -
Tpr1g3375 419 Gene3D - 9 387 IPR036188 -
Tpr1g3375 419 SUPERFAMILY FAD/NAD(P)-binding domain 8 383 IPR036188 -
Tpr1g3375 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 9 31 - -
Tpr1g3375 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 161 176 - -
Tpr1g3375 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 325 - -
Tpr1g3375 419 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 325 341 - -
Tpr1g3375 419 SUPERFAMILY FAD-linked reductases, C-terminal domain 186 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3375 Tpr-Chr1 38135549 38139804 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3375 - - gmx:100811757 710.294