Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3372 ATGGCAACCACAGTAAATATTGTATGCAAAAGAACTGTGGTGAGCACAAAGGCAATTGAACCAGGAAAATACTTACCTTTATCGGTTTTAGATCGTTTCATGGAGAAAAACCATATTAGAATGGTGTACTATTACCAAACTTCAGGAGAATTAGAGCTTGGAAAATTGACCAAGAAATTGAGAGAGACTTTGTCAGAAATGCTTACTCATTTCCCTATAGTAACTGGAAGGTTGTTAAGAGATGATATGGGACATTGGAAGATCAAGTGTAATGATGCTGGTGTTAGAACACTGGAAGCAAAAGCCAAAGGAAGTGTAGAAGAGTGGCTAAGAAATGTGGATAGGGAAAAGGAACTTGAACTTGTTTATTGGGAAGATATGCTTGAAAAGCCTTACTATTGGTCTACTTTTTATGTCCAGCTGACTGAATTTGAAGAAGGTGGATTAGCAATTGGCCTAAGCTGCACTCATCTCTTGGCAGATCCCATTTGTGCAACAAGATTCATGAAGGCTTGGGCTGACATTTCATTAGGCAACAAAATTACTTCACCTCCAATATTTCACCCTTTACCCCCTCAAAGATCACAAAACAAAAAGCCCAATAACAATAGCAACCCTTATATGGGCTTAATATCTCACTATAAATCCATAATTGAAAAGCCCATTTTTGTCAAGGAAGCAAAGTACACTACTATTTCTATGGGCTTTTCACACCACATGGTCCAGGCTTGCATGTCCATGGCCCAATTCATTGGTTCATCAAGCCCAAGCCCAACACCCTTTGATGCACTAGCTGGGTTGTTTTGGGTAACTTTAAGCAAAATCAAAGGGATAAAAAATGGATTTGTTGACATGTCCATATGTTTGGATGTAAGAAAAATCTTGGGCTTAGATCAAGGATTCTTTGGAAACTCAATGCTATATAATAAGGTGCATTTAGAAGAAAATCTCAATTTAGATTTAACTGAGAATAAGTTTCCACAAGCTACTAGGGCCATAAGGGATGTTGTGGCTAAAATTGACAATGATGAAATAATGGATCTAATTGAGTGGCTTGAAAATAATGATGTAAATTCATCTAAAATGATGAATGTTCATGATTTGATTATTACTAGCTTAGAGGATGTTGACCCTTATTTAGCTATGTTTCAAGATATGTTCAAACCAATTCGTTTCTCTTGTTACATAGAGCCAGTTTTTGGAGAAGGACATGTTTTGATTCTTCCAAATCCACTTGATGAGGGTCCCTTAGGAAGGGTGGTAATGGTGACACTTGAAGAAGAAGATGCAATTAAGCTTTGTGAAGATGACTTTATCTTACTATTCTCTCCAACTATCTTGATGAAATGTGTCAAATAA 1359 0.3687 MATTVNIVCKRTVVSTKAIEPGKYLPLSVLDRFMEKNHIRMVYYYQTSGELELGKLTKKLRETLSEMLTHFPIVTGRLLRDDMGHWKIKCNDAGVRTLEAKAKGSVEEWLRNVDREKELELVYWEDMLEKPYYWSTFYVQLTEFEEGGLAIGLSCTHLLADPICATRFMKAWADISLGNKITSPPIFHPLPPQRSQNKKPNNNSNPYMGLISHYKSIIEKPIFVKEAKYTTISMGFSHHMVQACMSMAQFIGSSSPSPTPFDALAGLFWVTLSKIKGIKNGFVDMSICLDVRKILGLDQGFFGNSMLYNKVHLEENLNLDLTENKFPQATRAIRDVVAKIDNDEIMDLIEWLENNDVNSSKMMNVHDLIITSLEDVDPYLAMFQDMFKPIRFSCYIEPVFGEGHVLILPNPLDEGPLGRVVMVTLEEEDAIKLCEDDFILLFSPTILMKCVK* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3372 452 Gene3D - 221 435 IPR023213 -
Tpr1g3372 452 Gene3D - 1 206 IPR023213 -
Tpr1g3372 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 450 - -
Tpr1g3372 452 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
Tpr1g3372 452 Pfam Transferase family 5 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3372 Tpr-Chr1 38120358 38123522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3372 12 410 Acyl Lipid Metabolism Gene Families AT3G23840 23.210 7.75e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3372 - - cam:101505678 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3372 1 38120358 38123522 Tpr1g3372 1 38120358 38123522 ECH