Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3364 ATGGATCCTTTCAAAGAAAAAGCAAAGTGTGTATGGATTCATGGACCTATCATTGTAGGAGCTGGTCCTTCTGGTATAGCAGTAGCAGCTTGTTTATCAGAACAAGGTGTTCCATCTCTCATTCTTGAGAGAAGTGATTGCATAGCTTCACTATGGCAAAACAAAACCTATGACCGTTTAAAACTTCATTTACCAAAACAATTTTGTGAACTACCTTTGATGAATTTTCCTCAAACTTTTCCTAAATATCCTACAAAACATCAATTCATTTCCTACATGGAATCTTATGCTGATCATTTTGATATTCATCCTAAGTTTAATCAAACTGTTCTTAGTGCTGAGTTTGATTCAAGTTCTGAAATTTGGATTGTTAAAACACATGATGGTTTTCAGTATTTTTCACCTTGGCTTGTTGTTGCTACTGGTGAAAATGCTGAACCTGTTATTCCTATAATTCATGGTATGGAACATTTTCATGGTCCTGTTGTTCATACTAGTGATTATAAATCTGGTTCTGAGTACAAAAACAAAAAGGTTTTAGTCATTGGTTGTGGTAATTCTGGTATGGAAGTTAGCTTAGATCTTTGTAGACACAATGCTATCCCTCACTTGGTTGCTAGAAACACAGTACATATTCTTCCAAGAGATATGTTTGGTTTCTCAACATATGGAATAGCTATGTCATTATACAAATGGCTTCCATTAAAATTAGTAGACAAGTTTCTCTTATTAGTGGCAAGCTTCCTTTTGGGAAACACAAACCACTATGGTATCAAAAGGCCTAAAACTGGTCCTATAGAGCTTAAACTTGCCACAGGGAAAACTCCTGTTCTTGATGTTGGTCAAATTTCACAAATTAAATCTGGTAACATTAAGGTGATGGAAGGAGTGAAGGAAATAACAAGAAATGGTGCAAAATTTTTGGATGGACAAGAAAAGGGATTTGATGCAATAATCTTAGCAACAGGATACAAGAGCAATGTGCCTAGTTGGCTTAAGGGGAATGATTTTTTCACTAAAGATGGAATGCCAAAAACACCCTTTCCTCATGGTTGGAAAGGTGAGCAAGGATTGTATACGGTGGGGTTCACAAGAAGAGGTCTACATGGAACATACTTTGATGCCATCAAAATTTCTGAAGACATTACTAAGCAATGGAAAACACTTAAGAATAAGAGTTGTAGTGATTCACATATCATACTACTTAACAAATCATGA 1218 0.3555 MDPFKEKAKCVWIHGPIIVGAGPSGIAVAACLSEQGVPSLILERSDCIASLWQNKTYDRLKLHLPKQFCELPLMNFPQTFPKYPTKHQFISYMESYADHFDIHPKFNQTVLSAEFDSSSEIWIVKTHDGFQYFSPWLVVATGENAEPVIPIIHGMEHFHGPVVHTSDYKSGSEYKNKKVLVIGCGNSGMEVSLDLCRHNAIPHLVARNTVHILPRDMFGFSTYGIAMSLYKWLPLKLVDKFLLLVASFLLGNTNHYGIKRPKTGPIELKLATGKTPVLDVGQISQIKSGNIKVMEGVKEITRNGAKFLDGQEKGFDAIILATGYKSNVPSWLKGNDFFTKDGMPKTPFPHGWKGEQGLYTVGFTRRGLHGTYFDAIKISEDITKQWKTLKNKSCSDSHIILLNKS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3364 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 15 37 - -
Tpr1g3364 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 135 143 - -
Tpr1g3364 405 PRINTS Pyridine nucleotide disulphide reductase class-II signature 174 198 - -
Tpr1g3364 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 16 35 - -
Tpr1g3364 405 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Tpr1g3364 405 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA1-RELATED 8 395 - -
Tpr1g3364 405 SUPERFAMILY FAD/NAD(P)-binding domain 17 216 IPR036188 -
Tpr1g3364 405 Gene3D - 16 389 IPR036188 -
Tpr1g3364 405 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Tpr1g3364 405 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 8 395 - -
Tpr1g3364 405 SUPERFAMILY FAD/NAD(P)-binding domain 176 387 IPR036188 -
Tpr1g3364 405 Pfam Flavin-binding monooxygenase-like 18 329 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3364 Tpr-Chr1 38022997 38026101 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3364 K11816 - gmx:100818280 662.144