Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3362 ATGGGTAGTGAGAGTATTGAAAAAATTCCATGTCTAGATTTTTCTATATATGATTCAAGATTTGATCAAGGGAGTGAAGAGTGGAAAAATATGAGCAAAAAAGTAAGAGAAGCATGTGAGAATTATGGTTGCTTTATCTTAATGTATGATAAAAATAATTTCCCATGTGAAAACATGTTAATGGGAATGAAAGATTTGTTTGATTTACCTGAAGAAATTAAGAGGAAGCATAAAAGTGATGTTCCTTTTAGTAGCTACAATGGTGGTGACTCTCCTACCATTCCTTTATGTCAAACCTTTGGAATTCATGATGCTCCCATTCAAGATAATTCTTTGGCTTTTACTAATCTCATGTGGCCTCAAGGAAATCCAACTTTCTGTGAGACACTAAAGGCTATGAACACCAAGATGGTTGAATTGCATTCCCTCATTCTAAAGATGATTCTAGATGGTTATGGTCTTCCAAAACAATATAATTCAACTATTGAAGAATTGAAGTACCATAGTAGTTTTAGATTCATGAAGTACAAAGTTCCTGAAATCAACAAAGATTGTGAAATTGCATTGGTACCTCACACTGACAAAAATACTTTAACCATTTTATGCCAAAATGAAGTACAAGGTCTTGAGATTCTTACTAAAGCAAATAAATGGATTCAATTGGATATACCTCAAGGAGGCTTTATTGTCATTGTTGGTGACGCACTCAAGGCATGGAGCAATGGGAGACTTCATGCACCTACACACAGAGTGACTATGTGTGGAGACAAAGAAAGATACTCATTTGGATTATTTACAATTCCAAAGGAAAAGGTGAAAATTGAGGTGCCACATGAATTGGTTGATGATAAAATGCATCCTCTACGTTATCGTTCATTCAAATATGGGGATTATTTAGACTACTTTGTTTCAACTCTCAAAGAAAATGCACTAGAAGCATTCATAGGTGTTTGA 954 0.3438 MGSESIEKIPCLDFSIYDSRFDQGSEEWKNMSKKVREACENYGCFILMYDKNNFPCENMLMGMKDLFDLPEEIKRKHKSDVPFSSYNGGDSPTIPLCQTFGIHDAPIQDNSLAFTNLMWPQGNPTFCETLKAMNTKMVELHSLILKMILDGYGLPKQYNSTIEELKYHSSFRFMKYKVPEINKDCEIALVPHTDKNTLTILCQNEVQGLEILTKANKWIQLDIPQGGFIVIVGDALKAWSNGRLHAPTHRVTMCGDKERYSFGLFTIPKEKVKIEVPHELVDDKMHPLRYRSFKYGDYLDYFVSTLKENALEAFIGV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3362 317 Gene3D - 6 314 IPR027443 -
Tpr1g3362 317 Pfam 2OG-Fe(II) oxygenase superfamily 179 265 IPR044861 -
Tpr1g3362 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 268 IPR005123 -
Tpr1g3362 317 SUPERFAMILY Clavaminate synthase-like 5 305 - -
Tpr1g3362 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 88 IPR026992 -
Tpr1g3362 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 314 - -
Tpr1g3362 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 5 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3362 Tpr-Chr1 37986287 37989528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3362 8 298 Glycosyltransferase AT5G59530 22.684 1.02e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3362 - - gmx:100817159 398.667