Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3361 ATGGCTACTCTTTCTGAAGCCTATAGAGATCACCCTCTTCACCTCAAACATATTATCCCCTTAGACTTTTCTTCATTTAGAACTTTACCTGATTCTCATGCATGGACTCAATCTAATGATGATGATGGTAATGATCATTTCACATCCAATGGAAGTTATAATGATGAAGATGGATCATGCATACCAATCATTGATCTCAATGATCCAAATGCAATGGAACATATAGGTCTTGCTTGTGAGAAATGGGGTGCCTTCCAATTGAAGAATCATGGCATACCTTTAAATTTAATTGAAGAAGTTGAAGGAGAGGCAAAGAGACTCTTTTCTCTTCCTTCCAAGGAGAAACTTAAGGCTCTTAGATCGGCCGGTGGCGCCACCGGATACGGCGCAGCTCGAATATCACCATTCTTCCCCAAATACATGTGGCATGAAGGATTTACAATTATGGGGTCCCCTTCCAATGATGCCAAAAAAATCTGGCCTAATGACTACAAACGATTTTGTGACATAATGGAGAGCTACCAAAAGCAAATGAAGACATTAGCAGAGAAACTAACAAACATAATATTCAACATATTAGGAATTTCCAAAGAACAAAACAAATGGGTTGGTTCAAACAACCATTGTGGAGCAATTCAACTAAATTTCTACCCATGTTGTCCAGACCCAAAAAAAGCAATGGGCTTGGCCCCACATACAGACACATCACTTTTCACAATTCTTCATCAAAGTCAAACAAGTGGACTTCAAATATTCAAAGAAGGTGTAGGGTATGTTCCTGTGGACCCTCAACCAAATACACTTGTTGTTAACACTGGTGACATTCTTCATATATTGTCAAATTCAAGGTTTAGATGTTCTCTTCATCGTGTTGTTGTGAATGAAATTAAGGATAGATATTCTATGGCTTATTTTTATGGACCCCCAATTGATTATTTGGTTAATCCTATTGTTGGTGATAATTCTTTGCCACATTTTCGTGCTTTGACTGTTAAGGATTATATTGGGATTAAAGCTAAGAATTTAGGGGGTGCTTTGTCTTTGATTAGTACATGTACATTAATTACTTGA 1071 0.3744 MATLSEAYRDHPLHLKHIIPLDFSSFRTLPDSHAWTQSNDDDGNDHFTSNGSYNDEDGSCIPIIDLNDPNAMEHIGLACEKWGAFQLKNHGIPLNLIEEVEGEAKRLFSLPSKEKLKALRSAGGATGYGAARISPFFPKYMWHEGFTIMGSPSNDAKKIWPNDYKRFCDIMESYQKQMKTLAEKLTNIIFNILGISKEQNKWVGSNNHCGAIQLNFYPCCPDPKKAMGLAPHTDTSLFTILHQSQTSGLQIFKEGVGYVPVDPQPNTLVVNTGDILHILSNSRFRCSLHRVVVNEIKDRYSMAYFYGPPIDYLVNPIVGDNSLPHFRALTVKDYIGIKAKNLGGALSLISTCTLIT* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3361 356 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 11 345 - -
Tpr1g3361 356 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 205 308 IPR005123 -
Tpr1g3361 356 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 161 IPR026992 -
Tpr1g3361 356 Gene3D - 16 341 IPR027443 -
Tpr1g3361 356 Pfam 2OG-Fe(II) oxygenase superfamily 212 308 IPR044861 -
Tpr1g3361 356 SUPERFAMILY Clavaminate synthase-like 18 342 - -
Tpr1g3361 356 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3361 Tpr-Chr1 37979020 37981701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3361 61 345 Glycosyltransferase AT5G59530 29.677 9.95e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3361 K04124 - gmx:100808546 535.028