Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3333 ATGGCTTTGGGGAGCAATGAGAAAAGAGAATCAATTTTCAAAGCTCCAAAATCACTTCTCTATGTAGGACTTGGCTTAGATTCTGATTCCCTTAGAAGCCCCACTTCACCACTAGATGTTACTTTGCTTTCAAATAGAGGTAACCCTTTAAGAACATCACCACCTAATGAGGGTCCACAAAGAGGTTGGAACTGTTCCAAAGTAGGTTTAAGTCTAATAGATTCTTTGGAAGATTGTTCCAAATTTTCTAGGAATGTTCTTTTATCATCTGAGTTTAATAAGGGTAATCTTAGTCCTAATCCTAGTCCTCAAATGATTACTAAAGTTCCTAATTGTAATCATTGTTTGGATTCTGTTAAGGCTTCTAAGTCCTTACCTAATGATTTTTTTAAGCTTCCTTATACACAAAATAGTTCTATTTTCCAAAAGGATGAATCTGAGTCCAATGTTGTTTTTGAAATCGGTGAACCATTGTTAGAACATGAATTACCCTTTGGAAAATCAATGTCTTGTTCATTGGACTTTTATAGTCCGATTAAAGATTCTAACTTTAATTCAAAATGTGGAAAATTTTGTTTGAAACCCCCTCATTTTATCGGAGAAAGCAAGAATCCAAACACATTGCTACCTGTGTCTCTATCTGCAAGTGAGATTGAAAATTCTGAGGACTATACATGTGTGATTTCGCACGGTCCTAATCCGAAGAAAACACATATTTTCTGTGACTGCATCTTAGAAATTCATGCTGGTGACGATGTTATAGAACATCAAAATAAGAACGAAGAGAAGGAGGGCTTGCTTTCTCCAGTGGTTGACAAATTAGAGACTCCGAACCAATATCCCTTTGGTGGTGGCTTTTTAGTTTTCTGCGACAATTGCAACAAGAAATTTGAAGAGGGGAAAGATATTTACATATATAGAGGCGAAAAAGCATTTTGCAGTTTAACTTGCCGCGCCCTTGAGATTATGATTGATGAGGAGCTAGAGGAATCCAATGCACCACCTGAAAACAACTTCATGGAGTTGGAATCTGGTGAAGACCTTGTTGGATCTAGCATCTTCACTGCTGAATAG 1074 0.3696 MALGSNEKRESIFKAPKSLLYVGLGLDSDSLRSPTSPLDVTLLSNRGNPLRTSPPNEGPQRGWNCSKVGLSLIDSLEDCSKFSRNVLLSSEFNKGNLSPNPSPQMITKVPNCNHCLDSVKASKSLPNDFFKLPYTQNSSIFQKDESESNVVFEIGEPLLEHELPFGKSMSCSLDFYSPIKDSNFNSKCGKFCLKPPHFIGESKNPNTLLPVSLSASEIENSEDYTCVISHGPNPKKTHIFCDCILEIHAGDDVIEHQNKNEEKEGLLSPVVDKLETPNQYPFGGGFLVFCDNCNKKFEEGKDIYIYRGEKAFCSLTCRALEIMIDEELEESNAPPENNFMELESGEDLVGSSIFTAE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3333 357 PANTHER FCS-LIKE ZINC FINGER 11 3 356 - -
Tpr1g3333 357 Pfam zinc-finger of the FCS-type, C2-C2 285 327 IPR007650 -
Tpr1g3333 357 PANTHER FCS-LIKE ZINC FINGER 11 3 356 IPR044585 -
Tpr1g3333 357 ProSiteProfiles Zinc finger FLZ-type profile. 285 329 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3333 Tpr-Chr1 37671759 37674253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3333 - - cam:101497948 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3333 1 37671759 37674253 Tpr1g3333 1 37671759 37674253 ECH
Tpr1g3333 1 37671759 37674253 Tpr7g0537 7 4573122 4575881 PCT