Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3332 ATGGCACGCCTTCTTCTGTGCCAAAAAGCAACAACCCGTAACCACCGTTGTAAGCCTTTGCACAGAGCACTGCAATTGTACGGCGTTTCCGTCGTCGGAATTTTTTGCCGCCGATCTAGGTCAATTTCAATCCCTAGAACCAAAGCAATGGAAAAATCATCACAAACCGAAGAACAATCACAATCACACGATTCTTCAACTTCATCACATGATCGCCAAAACTGGAAAACTGAGCAAAATATTCTGAAGGAAAAATTGATCACAGAGGATAATTTCACGTGGAAATTACCACCAAGTACATCACAAGAATTGAGATACGTTGGTGGTTGTGATATAAGCTTCTCAAAACATGATCCATCATTGGCTTGTGGTACACTTGTAGTTTTGGATTTTCACACTCTCGAAGTTGTTTATCAGGATTTCTCTTTGGTTACTTTGAATGTCCCTTATGTGGCTGGATTCCTTGCCTTTCGAGAGTTGCTAATGGTTGATGGAAATGGAATACTTCATCCCAGAGGTTTTGGCCTGGCCTGTCATATTGGAGTTACGGCCGATCTTCCAACGATCGGAGTTGGAAAGAACTTGCATTGTGTGGATGGTCTCAATCAATCTAGAGTGAGAAAACTTCTTGAAGCCAAAGAAAACACTTCCAAAGATTTTGTTACTTTGGTGGGTTGCTCTGGACGTACATGGGGAGTGGCCATGAGATCTACACAGGGATCCGTAAAGCCAATATTCATATCAATTGGTCACAGGATATCACTCCAGACTGCCACTGCGATTGTTCAAATGACTTGCAAGTATCGTGTCCCTGAGCCAATTAGGCAGGCTGATATAAGATCCAGAGACTACATTCGGAAGTTTGAAATGAATCCCAAACTGAGATTGCTTTCAGAATGA 900 0.4233 MARLLLCQKATTRNHRCKPLHRALQLYGVSVVGIFCRRSRSISIPRTKAMEKSSQTEEQSQSHDSSTSSHDRQNWKTEQNILKEKLITEDNFTWKLPPSTSQELRYVGGCDISFSKHDPSLACGTLVVLDFHTLEVVYQDFSLVTLNVPYVAGFLAFRELLMVDGNGILHPRGFGLACHIGVTADLPTIGVGKNLHCVDGLNQSRVRKLLEAKENTSKDFVTLVGCSGRTWGVAMRSTQGSVKPIFISIGHRISLQTATAIVQMTCKYRVPEPIRQADIRSRDYIRKFEMNPKLRLLSE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3332 299 CDD Endonuclease_V 75 283 IPR007581 GO:0004519|GO:0006281
Tpr1g3332 299 Pfam Endonuclease V 98 278 IPR007581 GO:0004519|GO:0006281
Tpr1g3332 299 PANTHER ENDONUCLEASE V 62 159 IPR007581 GO:0004519|GO:0006281
Tpr1g3332 299 PANTHER ENDONUCLEASE V 160 290 IPR007581 GO:0004519|GO:0006281
Tpr1g3332 299 MobiDBLite consensus disorder prediction 46 74 - -
Tpr1g3332 299 Gene3D archaeoglobus fulgidus dsm 4304 superfamily 59 288 - -
Tpr1g3332 299 PANTHER ENDONUCLEASE V 62 159 - -
Tpr1g3332 299 PANTHER ENDONUCLEASE V 160 290 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3332 K21813 - gmx:100527675 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3332 1 37660785 37665575 Tpr1g3332 1 37660785 37665575 ECH