Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3326 ATGGCCGTCACGGTGAAACATATGGCTTCGATTGTATCGGCGTTCGGGGTCGCATCTTTCATTTTGGGGGTTATTGCAGAAAACAAGAAGCCCGCAGCTGGAACACCGGTACCTAGTAACGATGGTGTATCGATCACGTGCCAGTACCCATCTGATCCAACTGTTGTGTTGGGGTTTCTTTCTGTAATTTTTCTTATTGCATCCACCATGACTGGGTATATGTCTTTGAATTACCCTTACAAAGGAAAGGCTATTCCACAAGGAGCTCTGTCAAAACACACTACTTTCACGGTATTCTTCAATATTGCATTGTTTACTACTGGATTTGCTGGAATGTTCTTATTATGGCCAACAATCACCGAACAAATTCAGTTGAAACACAACGTGCATCGCGATATCAACTACGCATGCCCTACAGCTAAAACTGGTCTCCTTGGTGGTGGTGCCTTTTTATCTCTTGATTCATCTCTGTTTTGGTTGGTTGCACTTATGCTAGCTGATAATGCTCGTGAGGATTATTTTGAAGAGCAAGAAGAAAATAAGGGTGAATAA 552 0.4257 MAVTVKHMASIVSAFGVASFILGVIAENKKPAAGTPVPSNDGVSITCQYPSDPTVVLGFLSVIFLIASTMTGYMSLNYPYKGKAIPQGALSKHTTFTVFFNIALFTTGFAGMFLLWPTITEQIQLKHNVHRDINYACPTAKTGLLGGGAFLSLDSSLFWLVALMLADNAREDYFEEQEENKGE* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3326 183 PANTHER OS07G0462200 PROTEIN-RELATED 1 181 - -
Tpr1g3326 183 Pfam Protein of unknown function (DUF1218) 60 156 IPR009606 -
Tpr1g3326 183 PANTHER OS05G0465400 PROTEIN 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3326 Tpr-Chr1 37630162 37631404 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3326 - - cam:101495988 302.753