Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3314 ATGAAGAAAGAACATGCATGGCCGCAGTTCATAAGAAATCTTCTGATCATGGTAGGATCAAGACAACGATCAAATTTGAAGAGGCCTACTTGGATTATTGTTTTAGTGTTCTTAGTGTGCTTTTTTCTAATTGCTGCTTATATTTATCCTCTACGGAGCCCCTCAACGTGTTCTTTGTTTAACTCTAAAAGTTGTAGTGTTGTTGGTGGTGTTAGTACGTTTATTCAGCCACCACCCGTGCAGACACGGGAATTAACCGATGCAGAGATTCAATCTCGGGTTGTTATTAATGAAATTCTTAATTACTATACTGTTCAATCCAAGGTCCCAAAAGTTGCTTTTATGTTTTTGACCCCGGGTTCGTTACCTTTCGAGAAGCTCTGGCACACATTCTTCCGGGGCCATGAAGGAAAATTCTCTGTCTATGTACATGCATCAAAGGAAAAACCGGTACACGTCAGCCCCTATTTTGTTGGCCGAGACGTCCACAGTGAACCGGTGTCTTGGGGAAAAATTTCTATGGTTGAAGCAGAAAGGAGACTTTTGGCAAATGCACTTTTAGACCCTGATAACCAACATTTCGTCTTGTTGTCTGATAGTTGTGTACCGGTGCGCCGCTTTGATTTTGTGTACAACTACTTGTTATTAACAAGTGTCAGCTTTATTGACAGCTATGTGGATACTGGTCCTCATGGAAATGGCAGGTATATAGAACATATGTTGCCTGAAGTAGAAAAGAAGGATTTTCGAAAGGGTTCACAGTGGTTCTCGATGAAACGACAGCATGCTATAATAACTATGGCGGACAGCCTGTATTTTAACAAATTCAAGCATCATTGCAGGCCAAATATGGAGGGAAATCGCAACTGTTATTCCGATGAGCATTACTTGCCAACATTTTTTAATATGCTTGATCCAGGTGGAATTGCAAATTGGTCGGTAACGTATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGGTCATTCAGGGCTCGTGATATTACTCACCAACTCATGAAAAAAATAGCATACATCGATGAAAGTCCGCATTATACAAGTGATGCAAAGAGAACAGTGGTGATCACGCCGTGCGAATTAAACGGCTCAAAACGATCTTGTTATCTATTCGCCCGGAAGTTTTATCCGGAAACTCAAGACAAATTGATTAAACTTTTCTCAAACTCCACAACATTCTAA 1197 0.4069 MKKEHAWPQFIRNLLIMVGSRQRSNLKRPTWIIVLVFLVCFFLIAAYIYPLRSPSTCSLFNSKSCSVVGGVSTFIQPPPVQTRELTDAEIQSRVVINEILNYYTVQSKVPKVAFMFLTPGSLPFEKLWHTFFRGHEGKFSVYVHASKEKPVHVSPYFVGRDVHSEPVSWGKISMVEAERRLLANALLDPDNQHFVLLSDSCVPVRRFDFVYNYLLLTSVSFIDSYVDTGPHGNGRYIEHMLPEVEKKDFRKGSQWFSMKRQHAIITMADSLYFNKFKHHCRPNMEGNRNCYSDEHYLPTFFNMLDPGGIANWSVTYVDWSEGKWHPRSFRARDITHQLMKKIAYIDESPHYTSDAKRTVVITPCELNGSKRSCYLFARKFYPETQDKLIKLFSNSTTF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3314 398 Pfam Core-2/I-Branching enzyme 112 342 IPR003406 GO:0016020|GO:0016757
Tpr1g3314 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 397 IPR044174 GO:0016757
Tpr1g3314 398 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 1 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3314 Tpr-Chr1 37527741 37533278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3314 - - gmx:100788165 712.605