Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3311 ATGTGTGGAAAGATGGGATTCAAAAGTTCTTCTTTTCTCTGTTTGGCTATTTTCTTTGCAATCTCATCTTCCATTCATGCATTTAACATCACAAAATTGTTAGGTCAAAATCCCGATTTTTCGACCTTCAACAATTACCTCACCGAAACCAAGCTTGTCGACCAAATCAACAGCCGCAACACCATCACCGTCCTCGCCCTTAGTAATGCCGCGATCTCTTCCATCTCTGGCAAATCTCCACAGGTTATCAAGGCCATCTTGAGCACCCATGTGATCCTTGACTTTTTCGATGAAAAGAAGCTCATGGAGGCTCACAATACTGGAGAATTGTTGACCACCCTTTACCAATCCTCAGGCCTCGCCGTTAACCAACAAGGGTTCCTTAGGGTTAAACTCATCGGTGAGGGTGCGCTGGCCTTTGGATCCGCTGTGAAAGATGCACCGATCGATGATGAGCTTGTCCAAACTGTTCTCTCCCAACCCTACAACATTTCCATACTCGAAATTGTGAAACCTATTGTGGCCCCTGGAATTGATTCACAAACCCCACCAGAGGGTGCTAAGGCTCCTGCGGCGGCATCAGCCAAGGCTCCTGTGCCAACTAAGGGTGCCAAAGCTGATGCTCCCACTCCTTCGTCAGAGGAAGTGACTTCTCCTCCTTCACCATCTGAAGTCGTCACAGACTCCCCAGCTGAAGCCCCAACAGCTGATGCTCCTGGTACCGGTGATGCCAAAACTCATCATAGTAGCTCTTCAAGGACTGTTGTAGGTTTGGTTGGAGCAGTGATGTGCTTTGCTTCTCTCTTGGCTGTTATGTAG 819 0.4811 MCGKMGFKSSSFLCLAIFFAISSSIHAFNITKLLGQNPDFSTFNNYLTETKLVDQINSRNTITVLALSNAAISSISGKSPQVIKAILSTHVILDFFDEKKLMEAHNTGELLTTLYQSSGLAVNQQGFLRVKLIGEGALAFGSAVKDAPIDDELVQTVLSQPYNISILEIVKPIVAPGIDSQTPPEGAKAPAAASAKAPVPTKGAKADAPTPSSEEVTSPPSPSEVVTDSPAEAPTADAPGTGDAKTHHSSSSRTVVGLVGAVMCFASLLAVM* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3311 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 213 IPR033254 -
Tpr1g3311 272 MobiDBLite consensus disorder prediction 181 252 - -
Tpr1g3311 272 ProSiteProfiles FAS1/BIgH3 domain profile. 27 158 IPR000782 -
Tpr1g3311 272 Pfam Fasciclin domain 38 125 IPR000782 -
Tpr1g3311 272 Gene3D FAS1 domain 27 165 IPR036378 -
Tpr1g3311 272 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 5 213 - -
Tpr1g3311 272 SUPERFAMILY FAS1 domain 34 124 IPR036378 -
Tpr1g3311 272 MobiDBLite consensus disorder prediction 211 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3311 Tpr-Chr1 37501748 37502989 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3311 - - gmx:100798739 282.337